Query= MSMg01no467_e08.b1 MSMg01no467_e08.b1 CHROMAT_FILE:
MSMg01no467_e08.b1 PHD_FILE: MSMg01no467_e08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:05 2005
(407 letters)
>mm_chr17_47286529_47287335
Length = 807
Score = 717 bits (371), Expect = 0.0
Identities = 398/407 (97%)
Strand = Plus / Minus
Query: 1 tccgaggtctcagctgtgagttggtgaggtaccaagaggccattcacggtctggcatcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tccgaggtctcagctgtgagttggtgaggtaccaagaggccattcacggtctggcatcaa 548
Query: 61 agtgagccctggttgccagttacacgtgaggctctcaatccctctgtctccattctggag 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 547 agtgagccctggttgccagttacacgtgaggctctcaatccttctgtctccattctggag 488
Query: 121 ttacaggtttgaatcaacatgtgcagctgttttgggctactgagaatctaaacactctcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 ttacaggtttgaatcaacatgtgcagctgttttgggctactgagaatctaaacactctcc 428
Query: 181 cctgtcgctgggagataccgataagacaagccaaagaacagccagaacttcaaaatccta 240
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 427 cctgtcgctgggagataccaataagacaagccaaagaacatccagaacttcaaaatccta 368
Query: 241 ttatttttacgtcagcgcggcgtgcacgaccacgtgagtgctcaggcttccccacgcatc 300
| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 ggaactttacgtcagtgcggcgtgcacgaccacgtgagtgctcaggcttccccacgcatc 308
Query: 301 tccctctccggtcctgttaaaccacaccctgccgtttcaaacaacatgcatttcccacat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 tccctctccggtcctgttaaaccacaccctgccgtttcaaacaacatgcatttcccacat 248
Query: 361 aaatacaggaagacgcttcatccatagtgtgacaaaatctctccggc 407
||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 247 aaatacaggaagacgcttcatccatagcgtgacaaaatctctccggc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 407
Length of database: 807
Length adjustment: 9
Effective length of query: 398
Effective length of database: 798
Effective search space: 317604
Effective search space used: 317604
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no467_e08.g1 MSMg01no467_e08.g1 CHROMAT_FILE:
MSMg01no467_e08.g1 PHD_FILE: MSMg01no467_e08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:43:05 2005
(411 letters)
>mm_chr17_47108321_47109131
Length = 811
Score = 764 bits (395), Expect = 0.0
Identities = 407/413 (98%), Gaps = 5/413 (1%)
Strand = Plus / Plus
Query: 1 attataggccaggctagcttggaactcaggggttgcaggtgtcagccagcaccacagctt 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attataggccaggctagcctggaactcaggggttgcaggtgtcagccagcaccacagctt 260
Query: 61 gtattatttcacaattcagatgtttagaagcaaacactctcaagcctcagtgggaggatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtattatttcacaattcagatgtttagaagcaaacactctcaagcctcagtgggaggatc 320
Query: 121 tcagaccacgccctgatgacacactagggtgtgtggaggtcatcagtcagaaaatatgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagaccacgccctgatgacacactagggtgtgtggaggtcatcagtcagaaaatatgag 380
Query: 181 gatgctcaacacagacctttcagaatggaaggagtcgttactacctgacctcatgacatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gatgctcaacacagacctttcagaatggaaggagtcgttactacctgacctcatgacatg 440
Query: 241 gaagttt--ataaaaaactccattcataatttagtaataatgggccaattccttggaaga 298
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaag---caataaaaaactccattcataatttagtaataatgggccaattccttggaaga 497
Query: 299 catgaactgtcaatgctcacttgaggaatgtataagctcagcaaggacatagtctatcag 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 catgaactgtcaatgctcacttgaggaatgtataagctcagcaaggacatagtctatcag 557
Query: 359 aggaactgagtcaggaattaataatctcttcaacatacacttaaggaagccat 411
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 aggaactgagtcaggaattaataatctcttcaacatacacttaaggaagccat 610
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
