Query= MSMg01no471_d01.b1 MSMg01no471_d01.b1 CHROMAT_FILE:
MSMg01no471_d01.b1 PHD_FILE: MSMg01no471_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:21 2005
(688 letters)
>mm_chr17_68081184_68082272
Length = 1089
Score = 1102 bits (570), Expect = 0.0
Identities = 579/582 (99%), Gaps = 1/582 (0%)
Strand = Plus / Minus
Query: 108 ttaaaagctgtgcaccaaggcatgtccttgtcatttgggctctggagaggttggaggtgc 167
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1089 ttaaaagctgtgcaccaaggcatgtccttgtcatttgggctctggagaggttggaggtgc 1030
Query: 168 gtaaaaacctgtggcttgttggccagccaacccagcctagtctatgagcccaggaaaatg 227
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1029 gtaaaaacctgtggcttgttggccagccaacccagcctagtctatgagcccaggaaaatg 970
Query: 228 aaagatctcatatgaaaaaaactaaagtggtggctcctgagggaatgacagacacctaag 287
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 969 aaagatctcatatgaaaaaaactaaagtggtggctcctgagggaatgacagacatctaag 910
Query: 288 gtcaccctttggtcacctcattgtgtacagatgtgtgcatgtactcacacgc-caaaaca 346
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 909 gtcaccctttggtcacctcattgtgtacagatgtgtgcatgtactcacacgcacaaaaca 850
Query: 347 aattgaaatactcatagatgactgagctggataaatagcaagtaaggttctgaccctgta 406
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 849 aattgaaatactcatagatgactgagctggataaatagcaagtaaggttctgaccctgta 790
Query: 407 cattcacacacatgtacctgtacatacatcatgtgtatacatgacaaatgaagaacttag 466
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 cattcacacacatgtacctgtacatacatcatgtgtatacatgacaaatgaagaacttag 730
Query: 467 aacagacacacctaggggaagaccatgtgaagacaggcacctgcaagccaaagacacgtc 526
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 aacagacacacctaggggaagaccatgtgaagacaggcacctgcaagccaaagacacgtc 670
Query: 527 gacctagaccgcagaccagtgaggaatccgttcctctaagttgcccagcctgtggtatct 586
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gacctagaccgcagaccagtgaggaatccgttcctctaagttgcccagcctgtggtatct 610
Query: 587 gttccagcagccccagctgactgacaaagccctcactcaccaattctagttgatgagcag 646
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gttccagcagccccggctgactgacaaagccctcactcaccaattctagttgatgagcag 550
Query: 647 gtcttagaatgaagaaacagagattctattgacttataaatt 688
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtcttagaatgaagaaacagagattctattgacttataaatt 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1089
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1079
Effective search space: 731562
Effective search space used: 731562
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no471_d01.g1 MSMg01no471_d01.g1 CHROMAT_FILE:
MSMg01no471_d01.g1 PHD_FILE: MSMg01no471_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:21 2005
(635 letters)
>mm_chr17_67912735_67913768
Length = 1034
Score = 1212 bits (627), Expect = 0.0
Identities = 633/635 (99%), Gaps = 1/635 (0%)
Strand = Plus / Plus
Query: 1 tgcttgggattctactcaagcaggaactaagagctaagtgacccatgaacatgaaccttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcttgggattctactcaagcaggaactaagagctaagtgacccatgaacatgaaccttc 260
Query: 61 aagatgatgcttgtctgtccacagggcctggccgcatgggccaagggaaagtattggttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagatgatgcttgtctgtccacagggcctggccgcatgggccaagggaaagtattggttc 320
Query: 121 gagtcattcagaaacatcagacactgacataatcaaacagataatttagttgacatgcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagtcattcagaaacatcagacactgacataatcaaacagataatttagttgacatgcaa 380
Query: 181 cagtaatgcagaaagttactaagcaaaaaagcaataacatctacaacaaaatttgagtag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagtaatgcagaaagttactaagcaaaaaagcaataacatctacaacaaaatttgagtag 440
Query: 241 ctttggaggaatgtaagatggaggcatggcatattattgtaaatttctaaacaaccaagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 441 ctttggaggaatgtaagatggaggcatggcatattattgtaaatttctaaataaccaagt 500
Query: 301 aggttgttttattataattattttgaaaagggtgtctgacccagactaatcccaaactcc 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ag-ttgttttattataattattttgaaaagggtgtctgacccagactaatcccaaactcc 559
Query: 361 ttaaggaaggtaaagagggccttgaacttgtgattgtttggttgccatctcctaagtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ttaaggaaggtaaagagggccttgaacttgtgattgtttggttgccatctcctaagtgct 619
Query: 421 agaactataggcaagaactccatacacaaccagttaatgtgttgtcagggatcaaacaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 agaactataggcaagaactccatacacaaccagttaatgtgttgtcagggatcaaacaca 679
Query: 481 gccttgtgtaggctaagcaagcatgctgtctatggacctatattctcagctcctacatgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gccttgtgtaggctaagcaagcatgctgtctatggacctatattctcagctcctacatgt 739
Query: 541 ctggttttaaacaacaaaaataagagtgcagggcccaaacaggttaaaaaagcagaaact 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctggttttaaacaacaaaaataagagtgcagggcccaaacaggttaaaaaagcagaaact 799
Query: 601 acaaacttttcttgagagaacacgggcaataagtt 635
|||||||||||||||||||||||||||||||||||
Sbjct: 800 acaaacttttcttgagagaacacgggcaataagtt 834
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 635
Length of database: 1034
Length adjustment: 10
Effective length of query: 625
Effective length of database: 1024
Effective search space: 640000
Effective search space used: 640000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
