Query= MSMg01no471_d06.b1 MSMg01no471_d06.b1 CHROMAT_FILE:
MSMg01no471_d06.b1 PHD_FILE: MSMg01no471_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:22 2005
(211 letters)
>mm_chr17_65588798_65589407
Length = 610
Score = 371 bits (192), Expect = e-107
Identities = 203/207 (98%), Gaps = 1/207 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaggcatgcacaggctgatgggaacaaataatgtatcatgtagatttatcacta 64
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 gaattcaaggcaaggacaggctgatgggaacaaataatgtatcatgtagatttatcacta 351
Query: 65 aagaattatcaaacattatagtagatttttttcttttaggttaatagtctacaaatagca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 aagaattatcaaacattatagtagatttttttcttttaggttaatagtctacaaatagca 291
Query: 125 ccctttacataaaggtgttttaaaattttaagttctatatgtaaaggttggggtccatag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 ccctttacataaaggtgttttaaaattttaagttctatatgtaaaggttggggtccatag 231
Query: 185 ganaataatatgccttttaataataag 211
|| |||||||||||||| |||||||||
Sbjct: 230 gaaaataatatgccttt-aataataag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 211
Length of database: 610
Length adjustment: 9
Effective length of query: 202
Effective length of database: 601
Effective search space: 121402
Effective search space used: 121402
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no471_d06.g1 MSMg01no471_d06.g1 CHROMAT_FILE:
MSMg01no471_d06.g1 PHD_FILE: MSMg01no471_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:48:22 2005
(582 letters)
>mm_chr17_65415522_65416503
Length = 982
Score = 994 bits (514), Expect = 0.0
Identities = 565/582 (97%)
Strand = Plus / Plus
Query: 1 tgagaggctctttgaaagggctgaagtgatccttagggaattggagatgtggttggagaa 60
|||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||
Sbjct: 201 tgagaggctctttgaaagggctgaagtgatccttagaaaattagagatatggttggagaa 260
Query: 61 gggattccttcgaatcagctgcttcaagacaaagaataatctggagagtcatggataaag 120
|| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 261 ggtattccttcgaatcagctgcttcaagacaaagaataatctggagggtcatggataaag 320
Query: 121 gggttgggaggtcggtaggtttattccaagagttggagtcaccagtgaatgaaattgggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gggttgggaggtcggtaggtttattccaagagttggagtcaccagtgaatgaaattgggg 380
Query: 181 gcaaaggcagggcaccagcaaacagactgttacagggctgagtgtgaagcaagagatctt 240
||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||
Sbjct: 381 gcaaaggcagggcaccagcaaacagactgctacagggctgagtgtgaaccgagagatctt 440
Query: 241 aaggaagaacaggaactagggtgtgaatcacctacctgattcccagctctgggtggctac 300
|| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacgaagaacagggactagggtgtgaatcacctacctgattcccagctctgggtggctac 500
Query: 301 tgggggtaccaagtacagagtgattctaggtactggagactggcacaaaggaataggaat 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggggtaccaggtacagagtgattctaggtactggagactggcacaaaggaataggaat 560
Query: 361 ggcctagaggggagggctgagagactccacaggaagaaggaaggctgacccttcgttaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggcctagaggggagggctgagagactccacaggaagaaggaaggctgacccttcgttaga 620
Query: 421 atttggtggagtcccaagagaatggaggtggaatgggagaagaggttcttacaggaaagg 480
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 621 atttggtggagtcccaagagaatgaaggtggaatgggagaagaggttcttacaggaaagg 680
Query: 481 ggtgagatcataatggaagtcagaaagggaagtgaaaaccacacacctgaatccaggctc 540
|||||||||||||||||||||||||||| || |||||||||||||||||||||| |||||
Sbjct: 681 ggtgagatcataatggaagtcagaaaggaaaatgaaaaccacacacctgaatcccggctc 740
Query: 541 aattctgtgtggccactctggtattttctatcctctctgatc 582
| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agttctgtgtggccactctggtattttctatcctctctgatc 782
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 582
Length of database: 982
Length adjustment: 10
Effective length of query: 572
Effective length of database: 972
Effective search space: 555984
Effective search space used: 555984
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
