Query= MSMg01no472_e18.b1 MSMg01no472_e18.b1 CHROMAT_FILE:
MSMg01no472_e18.b1 PHD_FILE: MSMg01no472_e18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:53 2005
(271 letters)
>mm_chr17_50630912_50631583
Length = 672
Score = 487 bits (252), Expect = e-142
Identities = 264/268 (98%), Gaps = 1/268 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaaagt-ttccagttcaattatgcagtggtcaatactattacacactattttac 63
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaattcaaaagtagtacagttcaattatgcagtggtcaatactattacacactattttac 413
Query: 64 ataattgcatacagtctaacaataacatactatgcaatgtgcatattaatagtaatgcat 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 ataattgcatacagtctaacaataacatactatgcaatgtgcatattaatagtaatgcat 353
Query: 124 taatagtaatacataggagagtatgtattgcaataatcaaatgttctagaggcgttttac 183
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 352 taatagtaatacataggagagtatgtattgcaataatcaaatattctagaggcgttttac 293
Query: 184 attaaccatgttttaacggacttagctttctcttgctgtagagaagcttttgtctgcagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 attaaccatgttttaacggacttagctttctcttgctgtagagaagcttttgtctgcagg 233
Query: 244 agaggagaggaaatgtttgtgacactac 271
||||||||||||||||||||||||||||
Sbjct: 232 agaggagaggaaatgtttgtgacactac 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 271
Length of database: 672
Length adjustment: 9
Effective length of query: 262
Effective length of database: 663
Effective search space: 173706
Effective search space used: 173706
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_e18.g1 MSMg01no472_e18.g1 CHROMAT_FILE:
MSMg01no472_e18.g1 PHD_FILE: MSMg01no472_e18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:49:53 2005
(433 letters)
>mm_chr17_50445855_50446687
Length = 833
Score = 791 bits (409), Expect = 0.0
Identities = 427/433 (98%)
Strand = Plus / Plus
Query: 1 ttcggctcttttttatggatactctcttgtgtatatttatataaaatattttgtatttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcggctcttttttatggatactctcttgtgtatatttatataaaatattttgtatttgt 260
Query: 61 acttatagaaaatacttaagtagaggatctatgacattttatacttgtagagtatataca 120
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 acttatagaaaatacttaagtagaggatctatgacagtttatacttgtagagtatataca 320
Query: 121 gttaggctttaaatttgtccttagggagaatatgtcccttgtgttgccttttgttctgtg 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 gttaggctttacatttgtccttagggagaatatgtcccttgtgttgccttttgttctatg 380
Query: 181 gaaatatgagtaaatacccaagaggataccagtgacaggcctaagaaattgttccatctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaaatatgagtaaatacccaagaggataccagtgacaggcctaagaaattgttccatctg 440
Query: 241 tggttttttgaatatggatggtcccatggattcatgtatttgaatgcttggacacaggga 300
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggtggtttgaatatggatggtcccatggattcatgtatttgaatgcttggacacaggga 500
Query: 301 atagcactgttaaaatgtgtgaccttgttggaagaagtgtgtcacagagaggtgggcttt 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atggcactgttaaaatgtgtgaccttgttggaagaagtgtgtcacagagaggtgggcttt 560
Query: 361 gaggtctatatatatgcccaagctctgcccagtgtggaccacagtctccttctgctgctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gaggtctatatatatgcccaagctctgcccagtgtggaccacagtctccttctgctgctt 620
Query: 421 gtggatcaagatg 433
|||||||||||||
Sbjct: 621 gtggatcaagatg 633
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 433
Length of database: 833
Length adjustment: 9
Effective length of query: 424
Effective length of database: 824
Effective search space: 349376
Effective search space used: 349376
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
