Query= MSMg01no472_k03.b1 MSMg01no472_k03.b1 CHROMAT_FILE:
MSMg01no472_k03.b1 PHD_FILE: MSMg01no472_k03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:20 2005
(237 letters)
>mm_chr17_47855440_47856077
Length = 638
Score = 437 bits (226), Expect = e-127
Identities = 232/234 (99%), Gaps = 1/234 (0%)
Strand = Plus / Minus
Query: 5 gaattccagagt-atttcaaggccagcttagggtatttagtttatggttctgtggcaaag 63
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gaattccagagtaaattcaaggccagcttagggtatttagtttatggttctgtggcaaag 379
Query: 64 caagcatgaggctctaggttctattccaaacacaagaaataaatcatggtgttaagagaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 caagcatgaggctctaggttctattccaaacacaagaaataaatcatggtgttaagagaa 319
Query: 124 taagggttcaaatggtagatacttgcccagcagcctctgggttctgcttccattattgtc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 taagggttcaaatggtagatacttgcccagcagcctctgggttctgcttccattattgtc 259
Query: 184 cagaaaagtggataaggagaagagagggaagggaggaagggaaggatagagaag 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 cagaaaagtggataaggagaagagagggaagggaggaagggaaggatagagaag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 237
Length of database: 638
Length adjustment: 9
Effective length of query: 228
Effective length of database: 629
Effective search space: 143412
Effective search space used: 143412
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no472_k03.g1 MSMg01no472_k03.g1 CHROMAT_FILE:
MSMg01no472_k03.g1 PHD_FILE: MSMg01no472_k03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:50:20 2005
(334 letters)
>mm_chr17_47678840_47679572
Length = 733
Score = 582 bits (301), Expect = e-170
Identities = 319/325 (98%), Gaps = 1/325 (0%)
Strand = Plus / Plus
Query: 1 cttggtacagatgacagccatgtctggttcagtgcttgaaagtcccacccacacaaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttggtacagatgacagccatgtctggttcagtgcttgaaagtcccacccacacaaccac 260
Query: 61 aggcaactttgccctggggtgactgaagacagttgcaccacacccccagaggagcccagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aggcaactttgccctggggtgactgaagacagttgcaccacacccccagaggagcccagc 320
Query: 121 tgtctctgcttgccctcattcagccacctgaactcattcactgttttcctgtcagttggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtctctgcttgccctcattcagccacctgaactcattcactgttttcctgtcagttggg 380
Query: 181 ccatgcttgggaagaggcccctgtgggtggggaggggccgtgtgtttcatttgctgtggg 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 ccatgcttgggaagaggcccctgtgggtggggaggggctgtgtgtttcatttgctgtggg 440
Query: 241 gttttttgtctttcctcaggctttagcagaacaggtgccggccaatcagctgggtgaaat 300
||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 441 gttcggtgtctttcctcaggctttagcagaacaggtgccggccaaccagctgggtgaaat 500
Query: 301 gaggacaatcttccccccccccccg 325
||||||||||| |||||||||||||
Sbjct: 501 gaggacaatct-ccccccccccccg 524
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 733
Length adjustment: 9
Effective length of query: 325
Effective length of database: 724
Effective search space: 235300
Effective search space used: 235300
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
