ACCTTTTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGAGAATC
CGCGGAATTCTGCAAGAATTTTCTCCAGATATTTAAATTTGCAAGAATAT
GGAATATGTTTAAAACTAATATTTATGAATACTCTCATAAAATGTTAGGG
TTTAATGAATAAATCATCAAATATGAGTTTTCATGGCAAGATATTAATTA
AATATTCTATTATGGTGTAGGGGCATATAACATTGAATGAAAGTCAGGGA
GGGCTGAGAGGCAGGAGCAAAGACAAGCCCTTTTTAGTATGTATTTATCA
CAAAGTTAGATGAGAGAGTTAAAGAATATCTGTTATCTGAGGGGCAGGGC
AAAAAGAGAATTTCATTTAAAAAACTAGTAGTAAATTATGTACAATGTAC
TATTGATAAATTCTACAGTTCCAATTAGTATTCCTGAGTGGGGAAATAAT
TCAATACAGGCAATTTTGTGAGATACTAAATTCTTAGCGATAACCTAGAT
GATTACCAAAGTACCACAGAATTATCTGAAAATTGTTAGAAACAAAATTT
TTAATAGGCCAGACTGAAGCCTTTTCTAAAATATAAAAATAGTGTCATTT
TTTTTTAAGCTAAAGTGTTCTGGCAGAAATTCAGACTTTGATGGAGCTTA
AGACTATACAAATGATATCCAGATATCAGATGGAGCTTATGACTATAGAT
ATGATATTCAGAGACCAGGTTGCCTGACCTTCCGGCAGGGAGTCTTTTCG
A

NCCCCCTCGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGGACAGAGTATCTCTTC
ATGAGATAAACAAGCACAAAGAAAAAGCAAAAGTAACTAGTAAAGGTAAT
CCTTTAACTTACAAACTGTGCACTATGATCTCACGTGCCAACAAAGAAGG
CTCAGTGCATTGGCTGTCATCATTGCAATAAATCATTTTGTTAATTATGG
TTCTCAAGAGAAACAATGGACATGCGATGGCCACAATTATGGCAGCACCT
TATTGGATACATGCAGCTGTACAGTTTATTATAAGGTGTTGGGCAAAGTA
GCTTTGGAAGCTAAGAAATTACACCACCTGGAGATGCAGAACAATGAGCT
ATATAGTTTTAATTATGGTCAACCAGAAAGCTCTTGCCATGGCCTCTTTC
TAAGTTTGATGGTTTGAGAGGAAGAACTGAAAGCATCTGTAGAATGTCCT
GTTCAACAGGAACAATTATTGCAATCTACCTCCTTGATGGACTGGCTAAT
GCCCACCCATACTGAAGAGGGACAGCTGTTTATTCACTCAGCTAATCCCC
TGACATGACCACTTTCTTTCCCGATAAACACCCACCCAGTGCCTTAACCA
GCCTCTTATGTTTCCCCTGAATCACTTCCCCTTGCCTATTTTAATTACCC
CTTTCTCGCACCACATAACCTCTTCCCCATGGCACTTATTTCG

Query= MSMg01no475_d01.b1 MSMg01no475_d01.b1 CHROMAT_FILE:
MSMg01no475_d01.b1 PHD_FILE: MSMg01no475_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:53 2005
         (533 letters)



>mm_chr17_41685821_41686753
          Length = 933

 Score =  977 bits (505), Expect = 0.0
 Identities = 523/529 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   agatatttaaatttgcaagaatatggaatatgtttaaaactaatatttatgaatactctc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 729 agatatttaaatttgcaagaatatggaatatgtttaaaactaatatttatgaatactctc 670

                                                                       
Query: 61  ataaaatgttagggtttaatgaataaatcatcaaatatgagttttcatggcaagatatta 120
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 669 ataaaatgttagggtttaatgaataaatcatcaaatatgagtttccatggcaagatatta 610

                                                                       
Query: 121 attaaatattctattatggtgtaggggcatataacattgaatgaaagtcagggagggctg 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 609 attaaatattctattatggtgtagggacatataacattgaatgaaagtcagggagggctg 550

                                                                       
Query: 181 agaggcaggagcaaagacaagccctttttagtatgtatttatcacaaagttagatgagag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 agaggcaggagcaaagacaagccctttttagtatgtatttatcacaaagttagatgagag 490

                                                                       
Query: 241 agttaaagaatatctgttatctgaggggcagggcaaaaagagaatttcatttaaaaaact 300
           |||||||||||||||| || |||||||||||||||||||||||||||||||||||||| |
Sbjct: 489 agttaaagaatatctgctagctgaggggcagggcaaaaagagaatttcatttaaaaaatt 430

                                                                       
Query: 301 agtagtaaattatgtacaatgtactattgataaattctacagttccaattagtattcctg 360
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 agtagtaaattatgtacaatgtactattgataaattctacagttccaattagtattcccg 370

                                                                       
Query: 361 agtggggaaataattcaatacaggcaattttgtgagatactaaattcttagcgataacct 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 agtggggaaataattcaatacaggcaattttgtgagatactaaattcttagcgataacct 310

                                                                       
Query: 421 agatgattaccaaagtaccacagaattatctgaaaattgttagaaacaaaatttttaata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 agatgattaccaaagtaccacagaattatctgaaaattgttagaaacaaaatttttaata 250

                                                            
Query: 481 ggccagactgaagccttttctaaaatataaaaatagtgtcatttttttt 529
           |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggccagactgaagccttttctaaaatataaaaatagtgtcatttttttt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space:   482729
Effective search space used:   482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no475_d01.g1 MSMg01no475_d01.g1 CHROMAT_FILE:
MSMg01no475_d01.g1 PHD_FILE: MSMg01no475_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:53:53 2005
         (459 letters)



>mm_chr17_41520697_41521555
          Length = 859

 Score =  857 bits (443), Expect = 0.0
 Identities = 455/459 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggacagagtatctcttcatgagataaacaagcacaaagaaaaagcaaaagtaactagta 60
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tggacagagtatctcttcatgagataaacaagcacaaagaaaaagcaagagtaactagta 260

                                                                       
Query: 61  aaggtaatcctttaacttacaaactgtgcactatgatctcacgtgccaacaaagaaggct 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaggtaatcctttaacttacaaactgtgcactatgatctcacgtgccaacaaagaaggct 320

                                                                       
Query: 121 cagtgcattggctgtcatcattgcaataaatcattttgttaattatggttctcaagagaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagtgcattggctgtcatcattgcaataaatcattttgttaattatggttctcaagagaa 380

                                                                       
Query: 181 acaatggacatgcgatggccacaattatggcagcaccttattggatacatgcagctgtac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acaatggacatgcgatggccacaattatggcagcaccttattggatacatgcagctgtac 440

                                                                       
Query: 241 agtttattataaggtgttgggcaaagtagctttggaagctaagaaattacaccacctgga 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtttattataaggtgttgggcaaagtagctttggaagctaagaaattacaccacctgga 500

                                                                       
Query: 301 gatgcagaacaatgagctatatagttttaattatggtcaaccagaaagctcttgccatgg 360
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 501 gatgcagaacaatgagctatatagttttaattattgtcaaccagaaagctcttgccatgg 560

                                                                       
Query: 361 cctctttctaagtttgatggtttgagaggaagaactgaaagcatctgtagaatgtcctgt 420
           ||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 cctctttctaaatttgatggtttgagaggaagaactgaaaacatctgtagaatgtcctgt 620

                                                  
Query: 421 tcaacaggaacaattattgcaatctacctccttgatgga 459
           |||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcaacaggaacaattattgcaatctacctccttgatgga 659


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 459
Length of database: 859
Length adjustment: 10
Effective length of query: 449
Effective length of database: 849
Effective search space:   381201
Effective search space used:   381201
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)