Query= MSMg01no477_g10.b1 MSMg01no477_g10.b1 CHROMAT_FILE:
MSMg01no477_g10.b1 PHD_FILE: MSMg01no477_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:50 2005
(692 letters)
>mm_chr17_61687841_61688932
Length = 1092
Score = 1257 bits (650), Expect = 0.0
Identities = 677/686 (98%), Gaps = 2/686 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaacggctcaggtattagaggttaaatgatccattgttaggaactctaaattc 64
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttaacaactcaggtattagaggttaaatgatccattgttaggaactctaaattc 264
Query: 65 aagcacatcttttcaaaagtatctctacagaaaggaaaggctttacaagtttcgacttac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagcacatcttttcaaaagtatctctacagaaaggaaaggctttacaagtttcgacttac 324
Query: 125 agactttagtcaagcttatgcaaaattaaaccttacagtatgcttattacacctcaattt 184
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 325 agactttagtcaagcttatgcaaaattaaaccttacattatgcttattacacctcaattt 384
Query: 185 caagaactcttatctggaaggaatgggaaccaaaacagatgttgatatctgtgtgctcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caagaactcttatctggaaggaatgggaaccaaaacagatgttgatatctgtgtgctcta 444
Query: 245 tctacagatagttacactccacacgcaaatattagcaggcaaaggaagataaataaaaaa 304
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 445 tctacagatagttacactccacacacaaatattagcaggcaaaggaagataaataaaaaa 504
Query: 305 tgctt-aaaacaagtaaataacaggagaggaaagaaagaatatgcattgcacaacgcatt 363
||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgctttaaaa-aagtaaataacaggagaggaaagaaagaatatgcattgcacaacgcatt 563
Query: 364 ccatgaagtaaaagagtttattaatgttagatcaatattactctaatgcacctaattttt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ccatgaagtaaaagagtttattaatgttagatcaatattactctaatgcacctaattttt 623
Query: 424 ccacagattacatgtgaatgcaaaagacaaaaataaagtaaagttaattagagactagac 483
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 624 ccacagattacatgtgaatgcaaaagacaaaaataaagtacagttaattagagactagac 683
Query: 484 ttatatttactagaaactaaatagtaaagctggagattggccttgcctgttccttgattc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ttatatttactagaaactaaatagtaaagctggagattggccttgcctgttccttgattc 743
Query: 544 atctttttttttcaaaaccctagagtagtttatttcattcatatgaacaaaattcactga 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 atctttttttttcaaaaccctagagtagtttatttcattcatatgaacaaaattcactga 803
Query: 604 aaagatactgtaattttatattgctaagtgtcatacctaatgaattattaagaggtaata 663
||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||
Sbjct: 804 aaagatactgtaattttatcttgctaagtgtcatacctaatgaactattaagaggtaata 863
Query: 664 atacccatctcagaacaggttttact 689
||||||||||||||||||||||||||
Sbjct: 864 atacccatctcagaacaggttttact 889
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 692
Length of database: 1092
Length adjustment: 10
Effective length of query: 682
Effective length of database: 1082
Effective search space: 737924
Effective search space used: 737924
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no477_g10.g1 MSMg01no477_g10.g1 CHROMAT_FILE:
MSMg01no477_g10.g1 PHD_FILE: MSMg01no477_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:50 2005
(616 letters)
>mm_chr17_61874297_61875306
Length = 1010
Score = 1036 bits (536), Expect = 0.0
Identities = 577/594 (97%), Gaps = 6/594 (1%)
Strand = Plus / Minus
Query: 1 tgattgtgcttatttttctggacttggtcatttgttaataaagagacagtaaaagaagcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 tgattgtgcttatttttctggacttggtcatttgttaataaagagacagtaaaagaagcc 529
Query: 61 tgtggagcaatgctttaaatacatatgactaataagagtagtattatttaaaatatgttt 120
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 528 tgtggagcaatgctttaaatacatatgactaatgagagtagtattatttaaaatatgttt 469
Query: 121 atcagattatatttattcaattagtacattttattgtaatgaaaacaaaatctaatacaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 atcagattatatttattcaattagtacattttattgtaatgaaaacaaaatctaatacaa 409
Query: 181 gatgagaaaatattttttattcttattactatactactactagagagttttgttgctgtt 240
|||||||||||||||| | ||||||||||||||||||||||||||| || ||||
Sbjct: 408 gatgagaaaatattttgaactcttattactatactactactagagagatt------tgtt 355
Query: 241 gttgttgttttcttacatttgtttgttgagggaagggctcactttttccctatgctggac 300
|||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||
Sbjct: 354 gttgttgttttcttacatttgtttgttgagagaaggactcactttttccctatgctggac 295
Query: 301 agacattaacctgttaataatgtagactagttttgaattctcctgctttaactatcagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 agacattaacctgttaataatgtagactagttttgaattctcctgctttaactatcagaa 235
Query: 361 tactggattatatgtatcagccattgagtaaccgacttttcccaggaaaatacaaaacat 420
||||||||||||||||| |||||||||||||||||| ||||||||| |||||||||||||
Sbjct: 234 tactggattatatgtattagccattgagtaaccgacgtttcccagggaaatacaaaacat 175
Query: 421 atacatctactcacactaataaggaactaaatactgaacaaaggatgtataacaccaaag 480
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 174 atacatctactcacactaataaggaactaaatactgaacaaaggatgtataccaccaaag 115
Query: 481 tctgctttgatgatccagtgagttttattctgatttcttacaagaatatgggtgaaacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 tctgctttgatgatccagtgagttttattctgatttcttacaagaatatgggtgaaacct 55
Query: 541 tactgacaggggcagaaatgcctcagacattggcctctccaaacccaagcacag 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tactgacaggggcagaaatgcctcagacattggcctctccaaacccaagcacag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1010
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1000
Effective search space: 606000
Effective search space used: 606000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
