CAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTACGGATCCGCGGAA
ATTCACACCCCTAAGCCCCTCACCCCATAAAAACCCCTAGCTTTTGAGCC
TCGTGGCCGAATATCCTTATCTCCCTGGGGGGAACATGGCGGCCGGAGTC
CGGCATTAAACAACCCCTTGGTTGTCGGCAAGCAGGGCCAGCGCGGAGTT
TTTGGGCCACCCCAACCCGAAATGAAGGGGGGTTACGCCCNAGGCCACAA
ACAAATTGNGAGGGTTTCTNCTTAGGNAGAAAAATTTTGGAGAGGGCCTT
AAAACCCCCACCCCNGGGGGGTAAAAGGGGGGGGGGGCCCTGGGGGGGGG
GAAAGAAAAAAAGGAAAAAAAATTTGTTNCCCNNNNNNNNNNCNNNNCCC
CTNAAGTTGCTCCACGATTAACCCCNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNATAGCTCATCGTTTGCCCGGNGN
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNCCCCCCTCACCCCCTCCCNNCTCCNCCTCTCTCCTTCCCCCCCTCTCT
TCCTCCNNTTTTTTTTNNNNNNNNNNNNCNNNNNNAAAAGAGAAAAGGGA
GGGGGGGGGCACCAAAAAACTAANTTTNNNNNNNNNNNNTNNNNCNNCCC
ACTTTTCNTACTATAATCCCCCCTTTACTACTCTCNNTCCATCCACCAAC
CCTCCCTCCNTATCATCTATTGTGGGGGGTG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTGTAAGAGACCTACTTCATGCAGTC
TGAATCTCATGAGCAATGGCATTCCTATAGAGGAACGCTATGACAGACAG
TTTGATGCCAGGTTTCCCCATAAAAATTCATATTTGAAGTAATGAACACT
CTAAATATTGTATTTTGGTCATTAAATAGTATACGTGCACATATTAAAAC
ATCACACTGTATCCCATAAAAATGAATCCATTCATAAATATAAACCCACT
CTATGCCTATAGGTAATTCTCTATTATAATAATATGCAAATAAACACTAA
TAAACATTAATATAAATTAGCTAACATTAATGTTAACTTAATAGGTTATT
AAATGATTAATTGTATATTCTAATTAAACTGTGATATTTGGGGGTGTCTG
CTATGATTCAGGTTTGGTTCAATTTCAGTATGTATATTAGTTTGCTAAGG
AAGTCATAACAAGTATGGTATAGTGAGCAATTTCACAATTCTTGAGACTA
GCGCCCTGACAGCAAGGCGTATGTAATGGCAATTCCTTTTAATACTTGTA
GAGAATGACCTAGTTTGCTTACTTTTTCCAACCTCTGCTAGTTTACTGGC
ATTCACCTTGCACCTTGGTATCCAGAATGTTGCTTTGATGTGTAGGTAAT
ATTTCTCCAACACTTGCCTCTTTGTTCAAGGTTCTACTTATAAGGATACA
GATTACTTCAGTTCAGAGCTT

Query= MSMg01no477_h17.g1 MSMg01no477_h17.g1 CHROMAT_FILE:
MSMg01no477_h17.g1 PHD_FILE: MSMg01no477_h17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:56:56 2005
         (691 letters)



>mm_chr17_60090539_60091629
          Length = 1091

 Score = 1259 bits (651), Expect = 0.0
 Identities = 681/691 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttgtaagagacctacttcatgcagtctgaatctcatgagcaatggcattcctatagagg 60
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 201 cttgtaagagacctacttcatgcagtctgaatctgttgagcaatggcattcctatagagg 260

                                                                       
Query: 61  aacgctatgacagacagtttgatgccaggtttccccataaaaattcatatttgaagtaat 120
           ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 261 aacgctatgacagacagtttgatgccaggtttctccataaaaatttatatttgaagtaat 320

                                                                       
Query: 121 gaacactctaaatattgtattttggtcattaaatagtatacgtgcacatattaaaacatc 180
           |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 gaacactctaaacattgtattttggtcattaaatagtatatgtgcacatattaaaacatc 380

                                                                       
Query: 181 acactgtatcccataaaaatgaatccattcataaatataaacccactctatgcctatagg 240
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 381 acactgtatcccataaaaatgaatccattcataaatatacacccactctatgcctatagg 440

                                                                       
Query: 241 taattctctattataataatatgcaaataaacactaataaacattaatataaattagcta 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 taattctcaattataataatatgcaaataaacactaataaacattaatataaattagcta 500

                                                                       
Query: 301 acattaatgttaacttaataggttattaaatgattaattgtatattctaattaaactgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acattaatgttaacttaataggttattaaatgattaattgtatattctaattaaactgtg 560

                                                                       
Query: 361 atatttgggggtgtctgctatgattcaggtttggttcaatttcagtatgtatattagttt 420
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 561 atatttgggggtgtctgctatgactcaggtttggttcaatttcagtatgtatattagttt 620

                                                                       
Query: 421 gctaaggaagtcataacaagtatggtatagtgagcaatttcacaattcttgagactagcg 480
           |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 621 gctaaggaagtcataacaagtatggtatagtgagcaatttcacagttcttgagactagcg 680

                                                                       
Query: 481 ccctgacagcaaggcgtatgtaatggcaattccttttaatacttgtagagaatgacctag 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ccctgacagcaaggcgtatgtaatggcaattccttttaatacttgtagagaatgacctag 740

                                                                       
Query: 541 tttgcttactttttccaacctctgctagtttactggcattcaccttgcaccttggtatcc 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tttgcttactttttccaacctctgctagtttactggcattcaccttgcaccttggtatcc 800

                                                                       
Query: 601 agaatgttgctttgatgtgtaggtaatatttctccaacacttgcctctttgttcaaggtt 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 agaatgttgctttgatgtgtaggtaatatttctccaacacttgcctctttgttcaaggtt 860

                                          
Query: 661 ctacttataaggatacagattacttcagttc 691
           |||||||||||||||||||||||||||||||
Sbjct: 861 ctacttataaggatacagattacttcagttc 891


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space:   736161
Effective search space used:   736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)