Query= MSMg01no478_e01.b1 MSMg01no478_e01.b1 CHROMAT_FILE:
MSMg01no478_e01.b1 PHD_FILE: MSMg01no478_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:56 2005
(241 letters)
>mm_chr17_67957805_67958445
Length = 641
Score = 456 bits (236), Expect = e-133
Identities = 239/240 (99%)
Strand = Plus / Plus
Query: 1 gcaaccattatccatacaaattccttaccaaattgaggagagcaggagagccatgttctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gcaaccattatccatacaaattccttaccaaattgaggagagcaggagagccatgttctc 260
Query: 61 atggcattttcgagcacagggataacgagggtggaacatgaaaatcttcccaaaaccaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atggcattttcgagcacagggataacgagggtggaacatgaaaatcttcccaaaaccaga 320
Query: 121 cctctcctccagaccttgtccctaggccagaatccatgcctgttccccagggtgatagtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 321 cctctcctccagaccttgtccctaggccagaatccatgcctgttccccagggtgagagtg 380
Query: 181 ctgaatcagtagactaaagaggcggtggaaataaacccaacatactgtgtgcttggcaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaatcagtagactaaagaggcggtggaaataaacccaacatactgtgtgcttggcaaa 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 241
Length of database: 641
Length adjustment: 9
Effective length of query: 232
Effective length of database: 632
Effective search space: 146624
Effective search space used: 146624
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no478_e01.g1 MSMg01no478_e01.g1 CHROMAT_FILE:
MSMg01no478_e01.g1 PHD_FILE: MSMg01no478_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:57:56 2005
(270 letters)
>mm_chr17_68081649_68082319
Length = 671
Score = 509 bits (263), Expect = e-149
Identities = 269/271 (99%), Gaps = 1/271 (0%)
Strand = Plus / Minus
Query: 1 ctcctgagggaatgacagacacctaaggtcaccctttggtcacctcattgtgtacagatg 60
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ctcctgagggaatgacagacatctaaggtcaccctttggtcacctcattgtgtacagatg 412
Query: 61 tgtgcatgtactcacacgc-caaaacaaattgaaatactcatagatgactgagctggata 119
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tgtgcatgtactcacacgcacaaaacaaattgaaatactcatagatgactgagctggata 352
Query: 120 aatagcaagtaaggttctgaccctgtacattcacacacatgtacctgtacatacatcatg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 aatagcaagtaaggttctgaccctgtacattcacacacatgtacctgtacatacatcatg 292
Query: 180 tgtatacatgacaaatgaagaacttagaacagacacacctaggggaagaccatgtgaaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 tgtatacatgacaaatgaagaacttagaacagacacacctaggggaagaccatgtgaaga 232
Query: 240 caggcacctgcaagccaaagacacgtcgacc 270
|||||||||||||||||||||||||||||||
Sbjct: 231 caggcacctgcaagccaaagacacgtcgacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 270
Length of database: 671
Length adjustment: 9
Effective length of query: 261
Effective length of database: 662
Effective search space: 172782
Effective search space used: 172782
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
