Query= MSMg01no479_c19.b1 MSMg01no479_c19.b1 CHROMAT_FILE:
MSMg01no479_c19.b1 PHD_FILE: MSMg01no479_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:04 2005
(626 letters)
>mm_chr17_44524629_44525651
Length = 1023
Score = 1042 bits (539), Expect = 0.0
Identities = 585/607 (96%), Gaps = 13/607 (2%)
Strand = Plus / Minus
Query: 20 gtggggggaggtgcttactccctcaggtgtttacaaaagaatttaaacataatagatagc 79
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 756 gtggggggaggtgctcactccctcaggtgtttacaaaagaatttaaacataatagatagg 697
Query: 80 ctgatgatt---------gcttcaacagaacagagtgacttggcagataactggaaccat 130
||||||||| |||||||| |||||||||||||||||||||||||||||||||
Sbjct: 696 ctgatgattgccgaaggagcttcaacggaacagagtgacttggcagataactggaaccat 637
Query: 131 gatggtttacagcctgtactatgctgcgaactctctgtgcaaatcaagagtggtgtatat 190
| ||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 636 ggtggtttaca---tgtactatgctgcaaactctctgtgcaaatcaagagtggtgtatat 580
Query: 191 tcattttcctttatgaagttttgtgattgctattaaaaatgtaactttgtttattatttg 250
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 579 tcattttcctttatgaagttttgtgattgctattaaaaacgtaactttgtttattatttg 520
Query: 251 ggaaatatacaaactaatgtcacgtaaatgggccattaatctgattgtagatgtgggtgt 310
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 ggaaatatacaaactaatgtcacgtaaatgggccattaatctgattgtagatgtgggtgt 460
Query: 311 ttctgtgcgtgtgcatggcgtggtgacacatgactctctgcaatgcacttgatcagtgac 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 ttctgtgcgtgtgcatggcgtggtgacacatgactctctgcaatgcacttgatcagtgac 400
Query: 371 attgatcactgggccccagctcctgtcactcttctagtaggtgctcggctctgacataag 430
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 399 attgatcactgggccccagctcctgtcactcttctagtaggtgctcagctctgacataag 340
Query: 431 tgctagaaaaacattgtgattttcatttatctgtatttacttattatcacagtgtggggc 490
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 tgctagaaaaacattgtgattttcatttatctgtatttacttattatcacagtgtggggc 280
Query: 491 acaggtgccaaagggcacacgtggaggtcagagaacaacctccaggagtcgagtctctcc 550
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 279 acaggtgccaaagggcacacgtggaggtcagagaacaacctccaggagtcgagtct-acc 221
Query: 551 tcgtaccatgtgtgtcctggggattgaactcaggtcctcagacaagcattcttaccctac 610
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 220 tcgtaccatgtgtgtcctggggattgaactcgggtcctcagacaagcattcttaccctac 161
Query: 611 taagctc 617
|||||||
Sbjct: 160 taagctc 154
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1023
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1013
Effective search space: 624008
Effective search space used: 624008
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_c19.g1 MSMg01no479_c19.g1 CHROMAT_FILE:
MSMg01no479_c19.g1 PHD_FILE: MSMg01no479_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:04 2005
(447 letters)
>mm_chr17_44382179_44383026
Length = 848
Score = 797 bits (412), Expect = 0.0
Identities = 439/448 (97%), Gaps = 1/448 (0%)
Strand = Plus / Plus
Query: 1 agaggtgaggggccggtgaggttgctcagcacttaatgtttgccatgcaagcattaagac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agaggtgaggggccggtgaggttgctcagcacttaatgtttgccatgcaagcattaagac 260
Query: 61 cagggtttagaaattcccttaactgcctagtgggcatggtgacctccctgtaatttcatc 120
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 261 cagggtttagaaattcccttaactgcctagtgggcatggtgacccccctgtaattttatc 320
Query: 121 attggaaggcagaagtaggggatcccccagagcaagctggacagcttgactagccacact 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attgaaaggcagaagtaggggatcccccagagcaagctggacagcttgactagccacact 380
Query: 181 ggggagctctgggtttgactgggagacacgggctcagcaaatgggagggaggtgcagtct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggggagctctgggtttgactgggagacacgggctcagcaaatgggagggaggtgcagtct 440
Query: 241 gatggataatgattccaaacatcgacctcagagctcccatacgcacacacacatatgcac 300
|||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 gatggagaatgattccaaacatcgacctcggagctcccatacgcacacacacatatgcac 500
Query: 301 agacacctccacacatgccacatgcaaagccatgcatacacataagcatgccacatgcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agacacctccacacatgccacatgcaaagccatgcatacacataagcatgccacatgcac 560
Query: 361 acacaaataactgaaggaagaaaaaaaaa-taaaatcctggatgctaatcaaaaatgggc 419
||||||||||||||||||||||||||||| || ||||||||| |||||||||||||||||
Sbjct: 561 acacaaataactgaaggaagaaaaaaaaaatagaatcctggacgctaatcaaaaatgggc 620
Query: 420 tggttacacggtgtgccgtggcatcagt 447
||||||||||||||||||||||| ||||
Sbjct: 621 tggttacacggtgtgccgtggcaccagt 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 848
Length adjustment: 10
Effective length of query: 437
Effective length of database: 838
Effective search space: 366206
Effective search space used: 366206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
