Query= MSMg01no479_g14.b1 MSMg01no479_g14.b1 CHROMAT_FILE:
MSMg01no479_g14.b1 PHD_FILE: MSMg01no479_g14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:24 2005
(625 letters)
>mm_chr17_44529893_44530915
Length = 1023
Score = 1100 bits (569), Expect = 0.0
Identities = 611/625 (97%), Gaps = 2/625 (0%)
Strand = Plus / Minus
Query: 1 aaaatgaggaatgtagcctcttctccagaagccccctaacctacaggaccttctttaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 aaaatgaggaatgtagcctcttctccagaagccccctaacctacaggaccttctttaaat 658
Query: 61 tgagctccatagcaacaaggcagttaccatctcgctatcttgagtagatcaataatgaac 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 tgagctccatagcaacaatgcagttaccatctcgctatcttgagtagatcaataatgaac 598
Query: 121 taggtctacaattaagggaaaccaatgtaatgtctagaagggtttgaagcctcagagaag 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 597 taggtctacaattaagggaaaccaat-taatgtctagaagggtttgaagcctcagagaag 539
Query: 181 acacagacctgccatctgaccacgtttaccttgacgcaagggaggaggggttatgtgaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 acacagacctgccatctgaccacgtttaccttgacgcaagggaggaggggttatgtgaaa 479
Query: 241 actgcattattattgtccccttggtcaggtaacctaagttccaaggtcacccaaccttga 300
||||||| | | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 actgcatca-cactgtccccttggtcaggtaacctaagttccaaggtcacccaaccttga 420
Query: 301 ggatgggtggggagttggaaggaaaaggacgttctcatgactacagagttagagcccatt 360
||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 419 ggatgggtggggagttggaaggaaaagaacgttctcatgactacagagctagagcccatt 360
Query: 361 gtaaagaatacagtgagcagaggaaggccagcagcatatgtgaggtcccaagtgaatgag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 gtaaagaatacagtgagcagaggaaggccagcagcatatgtgaggtcccaagtgaatgag 300
Query: 421 tattggtgagagcatgatatatcaatgaccccagtgccttgtcacaaagtcatcctaggg 480
|||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||
Sbjct: 299 tattggtgagagcatgatatatcaatgaccccagtgccctgtcatgaagtcatcctaggg 240
Query: 481 aattctagtggaatatttgtgtgcataaaatgttcaccatacaagcttgcaatcccacca 540
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 239 aattctagtggaatatttgtatgcataaaatgttcaccatacaagcttgcaatcccacca 180
Query: 541 acaatggaggagtgttcctctttctccacatcctcgccagcatctgctgtcacctgagtt 600
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 acaatggaggagtgttcccctttctccacatcctcgccagcatctgctgtcacctgagtt 120
Query: 601 tttgatcttagccattctgactggt 625
|||||||||||||||| ||||||||
Sbjct: 119 tttgatcttagccattttgactggt 95
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1023
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1013
Effective search space: 622995
Effective search space used: 622995
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_g14.g1 MSMg01no479_g14.g1 CHROMAT_FILE:
MSMg01no479_g14.g1 PHD_FILE: MSMg01no479_g14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:24 2005
(619 letters)
>mm_chr17_44366627_44367641
Length = 1015
Score = 1098 bits (568), Expect = 0.0
Identities = 608/628 (96%), Gaps = 13/628 (2%)
Strand = Plus / Plus
Query: 1 agagcatgccagcacacccagccgttttaaatgtgaattctgagacttgaactcaggtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 agagcatgccagcacacccagccgttttaaatgtgaattctgagacttgaactcaggtct 251
Query: 61 tcttgtccactgggcaagcattttaccaacagagcta-ttccc--------ccccccctg 111
||||||||||||||||||||||||||||||||||||| ||||| |||||||||
Sbjct: 252 tcttgtccactgggcaagcattttaccaacagagctatttccccaccccaaccccccctg 311
Query: 112 aatctttatgatggctacttccagcttttattccgagacatcaggtggagaatctacaag 171
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 aatctttatgatggctacttccagcttttattccgagacatcaggtggagaatctacaag 371
Query: 172 gactgttcatgagacacgctcccttctcattgcttcacagacaaaaactccagccaatga 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 gactgttcatgagacacgctcccttctcattgcttcacagacaaaaactccagccaatga 431
Query: 232 acctgtgtagtgtttatcggggaatttgactaaggcatacatactcatgcatctcttgct 291
|||||||||| | |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 432 acctgtgtagcgggcatcggggaatttgactaaggcataca----catgcatctcttgct 487
Query: 292 tcagaggcacggaagtgcaagggcagactgaagcaacaactcgcttaacagctcgtttat 351
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 488 tcagaggcacggaagtgcaagggcagactgaagcaacaactcgcttaagagctcgtttat 547
Query: 352 ctttcagcacaagcagggccagcgtgtacctgtcagaaagcacgagtgtgtgtctcataa 411
||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||
Sbjct: 548 ctttcagcacaagcaggaccagcgtgtacccgtcagaaagcacgagtgtgtgtctcataa 607
Query: 412 cttccaggagcttttaaaaatactggtgggccttggaaatattcccttctctgactccct 471
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 cttccaggagcttttaaaaatactggtgggccttggaaatattcccttctctgactccct 667
Query: 472 tccgtttagggtgtggctcccttgggtgattgtgtgtgctgcacggttcttggtgtaagt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tccgtttagggtgtggctcccttgggtgattgtgtgtgctgcacggttcttggtgtaagt 727
Query: 532 ttatttatttatttttaatgggaatacaatgactaggacatttcctgctttagtctgcca 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 ttatttatttatttttaatgggaatacaatgactaggacatttcctgctttagtctgcca 787
Query: 592 cttggaaaaggttcttctttcctcttta 619
||||||||||||||||||||||||||||
Sbjct: 788 cttggaaaaggttcttctttcctcttta 815
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1015
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1005
Effective search space: 612045
Effective search space used: 612045
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
