Query= MSMg01no479_i01.b1 MSMg01no479_i01.b1 CHROMAT_FILE:
MSMg01no479_i01.b1 PHD_FILE: MSMg01no479_i01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:31 2005
(668 letters)
>mm_chr17_67939463_67940530
Length = 1068
Score = 1220 bits (631), Expect = 0.0
Identities = 658/667 (98%), Gaps = 1/667 (0%)
Strand = Plus / Plus
Query: 1 tgatcggaagactacttgcaagagtgagtcgtttccttctacggttgggtcctggggctc 60
||||||||||||||||||| ||||||||| || |||||||||||||||||||||||||||
Sbjct: 202 tgatcggaagactacttgc-agagtgagttgtctccttctacggttgggtcctggggctc 260
Query: 61 aacctcaagctgtcaggcctggtgacaagtgcctctacacactgagcaatcccaccagtc 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 261 aacctcaagctgtcaggcctggtgacaagtgcctctacaccctgagcaatcccaccagtc 320
Query: 121 caccaaagggacttgatgcaatattcagatttctttattcaccattaatcatttgggtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caccaaagggacttgatgcaatattcagatttctttattcaccattaatcatttgggtgt 380
Query: 181 tctgctctttatgaacaaagtttagctgcactcgtctgtcgggtacaaaataatatcaca 240
|||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||
Sbjct: 381 tctgctctttatgaacaaagtttagcggcactcgtctgtcgggtacaaaatactatcaca 440
Query: 241 ttttagtactatgtggagtgtttaaaatcaaactaatttccactccgatcaccaacattt 300
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ttttagtacgatgcggagtgtttaaaatcaaactaatttccactccgatcaccaacattt 500
Query: 301 aacattgttagcatttaaaaatgactttcctcctaaaatttcaccatacagcacccactt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aacattgttagcatttaaaaatgactttcctcctaaaatttcaccatacagcacccactt 560
Query: 361 acagcatttgccatgatgactcgttgccaacaaagaagagaaacatcacacttacatcat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acagcatttgccatgatgactcgttgccaacaaagaagagaaacatcacacttacatcat 620
Query: 421 ctctgaaaaacgaatcctgtggagaagcaagcgaggggcctaatagacagttctctgtag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctctgaaaaacgaatcctgtggagaagcaagcgaggggcctaatagacagttctctgtag 680
Query: 481 aagacagacaagtgccttcagaggcactgagaaattccccacaccgctaatcattaggga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aagacagacaagtgccttcagaggcactgagaaattccccacaccgctaatcattaggga 740
Query: 541 gatgcaaatcaaaacaataatgagctatcccctcgcacctgctagggtgactattatcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gatgcaaatcaaaacaataatgagctatcccctcgcacctgctagggtgactattatcaa 800
Query: 601 aaagacacgagttaacaaataagggtgggatgtctggaaaaggaaatctcccacacggct 660
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 801 aaagacacgagttaacaaataagggtgggacgtctggaaaaggaaatctcccacacggct 860
Query: 661 ggatgga 667
|||||||
Sbjct: 861 ggatgga 867
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no479_i01.g1 MSMg01no479_i01.g1 CHROMAT_FILE:
MSMg01no479_i01.g1 PHD_FILE: MSMg01no479_i01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:59:31 2005
(642 letters)
>mm_chr17_68087265_68088306
Length = 1042
Score = 1141 bits (590), Expect = 0.0
Identities = 629/642 (97%)
Strand = Plus / Minus
Query: 1 aactggggtgaggggtcgtcagcgctgggtctgccattgatgagtgatgtgtgaatctgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 842 aactggggtgaggggtcgtcagcgctgggtctgccattgatgagtgatgtgtgaatctgg 783
Query: 61 atacaggcaaacatacatgtcagttgtatggacacgttaacatgtacacatgtacaataa 120
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 782 atacaggcaaacatacatgtcagttgtatggacaagttaacatgtacacatgtacaataa 723
Query: 121 agccctgtgacagaatcattacaaagatcaatctaaaagcaaccaaacaaaaacctcatc 180
|| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 722 agtcctgtgacagaatcattacaaagatcaatctaaaagcaagcaaacaaaaacctcatc 663
Query: 181 taacacatgttaggtactcataaacagtagccctagctttgccacggtttgggggttacc 240
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 662 taacacatgttaggtactcataaacagtagccctagctttgcctcggtttgggggttacc 603
Query: 241 catccttctacatcagagatttctggaactcttctagtagcatgactctcctcgtgttgt 300
|||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||
Sbjct: 602 catccttctacatcagagatttctggaactcttccagtagcatgagtctcctcgtgttgt 543
Query: 301 gggggtctattatgcgatagcttctaagaagcaaatgcccagtgccatggacaggctagg 360
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 542 gggggtctagtatgcgatagcttctaagaagcaaatgcccaatgccatggacaggctagg 483
Query: 361 gagggtaaggaaaacacaccccaaacttaaggatgtctgctgtcttagttaacctctgta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gagggtaaggaaaacacaccccaaacttaaggatgtctgctgtcttagttaacctctgta 423
Query: 421 actgaagatcttcctgcccagctcccaccatggagagcacctgagagttttcacaggggt 480
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 422 actgaagatcttcctgcccagctcccatcatggagagcacctgagagttttcacaggggt 363
Query: 481 cacacatcaagcaaggcgctggatgaccgaactgtttctgtttcctcagagtttcctgag 540
||| ||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||
Sbjct: 362 cacccatcaagcaaggcgctggatgaccgcactgtttctgtttcctcagaggttcctgag 303
Query: 541 gtgaatacattgagcacagttcctgggcagctccacccagctccacatctctgaacagga 600
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gtgaatacattgagcacagtccctgggcagctccacccagctccacatctctgaacagga 243
Query: 601 gggagaaggaggagggacgacacctttcagaagcacctttgc 642
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 gggagaaggaggagggacgacacctttcagaagcacctttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
