Query= MSMg01no480_h02.b1 MSMg01no480_h02.b1 CHROMAT_FILE:
MSMg01no480_h02.b1 PHD_FILE: MSMg01no480_h02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:44 2005
(645 letters)
>mm_chr17_90379320_90380364
Length = 1045
Score = 1180 bits (610), Expect = 0.0
Identities = 641/660 (97%), Gaps = 15/660 (2%)
Strand = Plus / Plus
Query: 1 acaaaatgaaaacgagaataggaaagcttgcatttttttttt-gagtccttagccacatg 59
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 186 acaaaatgaaaacgagaataggaaagcttgcatttttttttttgagtccttagccacatg 245
Query: 60 gactctaaagctttgcttcaaatcacctaaagtgtgcctcttgaaagctcccttgagaaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 gactctaaagctttgcttcaaatcacctaaagtgtgcctcttgaaagctcccttgagaaa 305
Query: 120 atgcgctgactcctttacgctaatgaacaactcatctatttccataaaacaagatacaag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 atgcgctgactcctttacgctaatgaacaactcatctatttccataaaacaagatacaag 365
Query: 180 ttacccagtgagttacactgaatgcagataaaatgattgactaccaaatcgcttaccttg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 ttacccagtgagttacactgaatgcagataaaatgattgactaccaaatcgcttaccttg 425
Query: 240 tggactaatactgtctctaaggaagaatatttgaattgtttcacacacacacacacacac 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tggactaatactgtctctaaggaagaatatttgaattgtttcacacacacacacacacac 485
Query: 300 acacacacacacac--------------tggattcatccctaaagtatgtgtcgacctaa 345
|||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 486 acacacacacacacacacacacacacactggattcatccctaaagtatttgtcgacctaa 545
Query: 346 aacataccttaatttgtattcctatttaaaaaaataaatgcgccatttagatcctaatag 405
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 546 aacataccttaatttgtattcctatttaaaaaaataaatgcgccatttagatcctaatag 605
Query: 406 tttttttaatctaattggctgtaaatgtagattcacatttattgcctagaataatgactc 465
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 tttttttaatctaattggctgtaaatgtagattcacatttattgcctagaataatgactc 665
Query: 466 catccataagaacattcttgtagaactggcttatggagcagccaagcttctaatcagttg 525
|||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 666 catccataagaatattcttgtagaactggcttacggagcagccaagcttctaatcagttg 725
Query: 526 tctaagtcattcttagtttttaccaccacaaatatcttcttttggttaccacttatgaca 585
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 tctaaatcattcttagtttttaccaccacaaatatcttcttttggttaccacttatgaca 785
Query: 586 ggtaaagtttatataacatttgaaactgggggcaatttaaagaggccagttaaatcagag 645
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 786 ggtaaagtttatataacatttgaaactgggggcaatttaaagaggccagttaaatcagag 845
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 54
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no480_h02.g1 MSMg01no480_h02.g1 CHROMAT_FILE:
MSMg01no480_h02.g1 PHD_FILE: MSMg01no480_h02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:00:44 2005
(645 letters)
>mm_chr17_90522354_90523398
Length = 1045
Score = 1208 bits (625), Expect = 0.0
Identities = 640/645 (99%)
Strand = Plus / Minus
Query: 1 agcagtgacaaaggatcatattcaaaggacattgctattttgtggtctggcaatgggaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 845 agcagtgacaaaggatcatattcaaaggacattgctattttgtggtctggcaatgggaca 786
Query: 61 gaaattatctcagccactacaactcacctcagtaagtagagggcactgaaacttagaagt 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 785 gaaattatctcagccactacaactcacctcagtaagtacagggcactgaaacttagaagt 726
Query: 121 ggatgtttgactcccacctccgatgaccttatgccatgtgaatatcatttattacacctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 ggatgtttgactcccacctccgatgaccttatgccatgtgaatatcatttattacacctt 666
Query: 181 tatggttgggatgggacgtttcctgtttatttcttttgttttattttttagattaaaaat 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 tatggttgggatgggacatttcctgtttatttcttttgttttattttttagattaaaaat 606
Query: 241 tgattttgttagttaaagcatagactccttgaaaactgaaattatgcaatgtaatttatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 tgattttgttagttaaagcatagactccttgaaaactgaaattatgcaatgtaatttatt 546
Query: 301 ttgtgctatgttttaagatgttctattcatgtgaaaggtataaaactctatttaatttat 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttgtgctatgttttaagatgctctattcatgtgaaaggtataaaactctatttaatttat 486
Query: 361 taaaaactaaaatagcagtctataagcccaaagtatgcctcagaatagtgatttagagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 taaaaactaaaatagcagtctataagcccaaagtatgcctcagaatagtgatttagagaa 426
Query: 421 caaaaatttcagccatgattctatggtgattatagtacttatgcaaatgtaattataatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caaaaatttcagccatgattctatggtgattatagtacttatgcaaatgtaattataatt 366
Query: 481 ctccgtacagaaatgcatatttgagcagaaaacactgcaataatcttattcagaagctac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ctccgtacagaaatgcatatttgagcagaaaacactgcaataatcttattcagaagctac 306
Query: 541 tctggtgaatactcttattgtcaggaagaatttgctgtattttaataattgtcaggcgac 600
|||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 305 tctgatgaatactcttattgtcaggaagaatttgctatattttaataattgtcaggcgac 246
Query: 601 cattatgattttattactgtactgtgtaattttcttggattggat 645
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 cattatgattttattactgtactgtgtaattttcttggattggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
