CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTTTCTTCTTTCAATTTGAGCAGTCACTCCAAACATTTGTTCAAAGA
GGCATCTCCTTTGGGATTGACTGTTAGCTTCCTGGTAATCTTTCTGTGAC
AATCAAGTGAGCTTTCTCTTATCTTTTGTGTTAAAGATTCAAATCTCCAT
GCAGCTCCACTCTAATGTCCCTTCTGAATGTTTTTGCCCTGATACTCACA
CAAAAAGAAATGTTTAGTTTGGCTCCAGACTGTCATTGATTCTGAGGTTT
TCAATGAGGGCATTGATAGAATCCTTACATTCCTACCACAGTGCCCGGTG
AATATTCTTCTTTTTGTTTAAATATTTTTTATTACTACATATTTTTCTCA
GTTACATTTAGAATGCTATCCCAAAATCCCCCATACCCTCCCTGCCACTC
CCCTACCCACCCATTCCCATTTGTTGGCCATGGCGTTCCCCTGTACTGGG
GCATATAAAGTTTGCCTGTCCAGTGGGCCTCTCTTTCCAGTGATGGCCGA
CTAGGCCATCTTTTGATACATATGCAGCTAGAGTCAAGAGCTCTGGGGTA
CTGGTTAGTTCATAATGTTGTTGCACCTACAGAGTTGCAGATCTCTTTAG
CTCCTTGGATACTTTCTCTAGCTCCTCCATTGGGGGCTCTGTGATCCATC
CAATAGCTGACTGTGAGCATCTACTTATGTGTTTGCTAGGCCCC

AATGCTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCTGATCTCTTCAATACTTTTAACATGAA
GGGTTGTTGTATTTTATCAAAGGCTTCTTCTGTATCTAAAAAGATGATCA
TATGATTTTTTTTGAGTTTGATTATATATTAGATTACATTAATGGATTTT
TATTTATTGAACCCAATTTGCATCCCAAGAATGAAGCCTACTTGATTGTG
GTGGATGATGGTTCTGATGTGTTCTTCGATTTGGTTGACAAGAATTTTAC
TGAGTATTTTACCATTAATATTCTTGTCTGAAGTGCTCTTTTTTTGTTTG
GGTACTTGTGTTGTTTAGGTCTCAGAGTAATTGTGGCTTCATAGAATGAA
TTAGGTAGTGGTCCTTCTGTTTCTGTTTTATGGAATAGTTTGCAGAATAT
TGGTATCATGTCTTCTTTGAAGTTCTCGTAGAATTTTCCACTAAACCCAT
CTAGTCCTGAAATTTTTTGGTTGGGAGATTTTTAATGACTTCTATTATTT
CCTTAGGGGATATGGACCTGTTTAGGAAGTCTACCTGCTCTTGATTTAAC
TTTGTTTTGTGGTATCCGGCTAGAAAACCATCCATTTCATCAAGATTTCC
CGGGTTTGTTGAGTATAGGCTTTTCTTAGTAGATCTGATGGTGTCTTGGA
TTTCCTCCATTTTTATTGGTATGTCTCCCTTTCATCTCAAATTTATTAAT
TTGCATCTGGGACCN

Query= MSMg01no481_i21.b1 MSMg01no481_i21.b1 CHROMAT_FILE:
MSMg01no481_i21.b1 PHD_FILE: MSMg01no481_i21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:14 2005
         (660 letters)



>mm_chr17_91555485_91556544
          Length = 1060

 Score = 1075 bits (556), Expect = 0.0
 Identities = 629/658 (95%), Gaps = 12/658 (1%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctttcttctt-tcaatttgagcagtcactccaaacatttgttcaaagaggcatct 63
           ||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 205 gaattctttcttcttatcaatttgagcagtcactccaaatatttgttcaaagaggcatct 264

                                                                       
Query: 64  cctttgggattgactgttagcttcctggtaatctttctgtgacaatcaagtgagctttct 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cctttgggattgactgttagcttcctggtaatctttctgtgacaatcaagtgagctttct 324

                                                                       
Query: 124 cttatcttttgtgttaaagattcaaatctccatgcagctccactctaatgtcccttctga 183
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttatcttttgtgttaaagattc-aatctccatgcagctccactctaatgtcccttctga 383

                                                                       
Query: 184 atgtttttgccctgatactcacacaaaaagaaatgtttagtttggctccagactgtcatt 243
            ||||||        |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtgtttt--------tactcaca-aaaaagaaatgtttagtttggctccagactgtcatt 434

                                                                       
Query: 244 gattctgaggttttcaatgagggcattgatagaatccttacattcctaccacagtgcccg 303
           ||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 435 gattctgagcttttcaatgagggcattgatagaatccctacattcctaccacagtgcccg 494

                                                                       
Query: 304 gtgaatattcttc-tttttgtttaaatattttttattactacatatttttctcagttaca 362
           ||||||||||||| ||||| |||||||||||||||||| |||||||||| |||| |||||
Sbjct: 495 gtgaatattcttcttttttttttaaatattttttattattacatattttcctcaattaca 554

                                                                       
Query: 363 tttagaatgctatcccaaaatcccccataccctccctgccactcccctacccacccattc 422
           |||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct: 555 tttagaatgctatcccaaaatcccccataccctccccgccacttccctacccacccattc 614

                                                                       
Query: 423 ccatttgttggccatggcgttcccctgtactggggcatataaagtttgcctgtccagtgg 482
           ||||||||||||| |||| |||||||||||||||||||||||||||||  |||||| |||
Sbjct: 615 ccatttgttggccctggcattcccctgtactggggcatataaagtttgtgtgtccaatgg 674

                                                                       
Query: 483 gcctctctttccagtgatggccgactaggccatcttttgatacatatgcagctagagtca 542
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gcctctctttccagtgatggccgactaggccatcttttgatacatatgcagctagagtca 734

                                                                       
Query: 543 agagctctggggtactggttagttcataatgttgttgcacctacagagttgcagatctct 602
           ||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 735 agagctccggggtactggttagttcataatgttgttgcacctacagggttgcagatctct 794

                                                                     
Query: 603 ttagctccttggatactttctctagctcctccattgggggctctgtgatccatccaat 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 ttagctccttggatactttctctagctcctccattgggggctctgtgatccatccaat 852


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space:   682500
Effective search space used:   682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)