Query= MSMg01no481_m02.b1 MSMg01no481_m02.b1 CHROMAT_FILE:
MSMg01no481_m02.b1 PHD_FILE: MSMg01no481_m02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:30 2005
(691 letters)
>mm_chr17_61360133_61361224
Length = 1092
Score = 685 bits (354), Expect = 0.0
Identities = 372/378 (98%), Gaps = 1/378 (0%)
Strand = Plus / Minus
Query: 5 gaattcaattttatttccgattctctaagatggaggaactaaatcactcattagaagtta 64
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 gaattcaattttaggtcagattctctaagatggaggaactaaatcactcattagaagtta 319
Query: 65 atgatacatgaaacgaacatggagaacttggggaaaacatgaaagtaactaaccttcaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 atgatacatgaaacgaacatggagaacttggggaaaacatgaaagtaactaaccttcaaa 259
Query: 125 ttatgacctttagc-aaaaaaaaaaaatgagtactatagtggaagcatagaaattatctt 183
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 ttatgaactttagcaaaaaaaaaaaaatgagtactatagtggaagcatagaaattatctt 199
Query: 184 ccataatatattagatggaaattttccacatgtagagaaagtgatgcccatttagatacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 ccataatatattagatggaaattttccacatgtagagaaagtgatgcccatttagatacc 139
Query: 244 agactcttaaagtataccaaagagtcaaggccatgtgctgaatggctcaattcttaaaca 303
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 agactgttaaagtataccaaagagtcaaggccatgtgctgaatggctcaattcttaaaca 79
Query: 304 gtgaaaatgaaaaaatcatgtctactcattctaaataagaacaacaacagatcatttttc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 gtgaaaatgaaaaaatcatgtctactcattctaaataagaacaacaacagatcatttttc 19
Query: 364 tgataccaacacaatctg 381
||||||||||||||||||
Sbjct: 18 tgataccaacacaatctg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1092
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1082
Effective search space: 736842
Effective search space used: 736842
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no481_m02.g1 MSMg01no481_m02.g1 CHROMAT_FILE:
MSMg01no481_m02.g1 PHD_FILE: MSMg01no481_m02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:02:30 2005
(625 letters)
>mm_chr17_61167403_61168427
Length = 1025
Score = 1147 bits (593), Expect = 0.0
Identities = 614/621 (98%)
Strand = Plus / Plus
Query: 5 taggttctgagaattttattcaaagaactgacataatggcttgcacagaatggcaaaagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 taggttctgagaattttattcaaagaactgacataatggcttgcacagaatggcaaaagt 264
Query: 65 agcaaagagaatttatgtaaagtgatgtaacttagaggggcatactgtcaagactgacac 124
||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 265 agcaaagtgaatttatgtaaagtgatgcaacttagaggggcatactgtcaagactgacac 324
Query: 125 tgcaatctgaggaccttatgttccctccttcattggctcagtgtctttgaattgcaggga 184
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 325 tgcaatctgaggaccttatgttccctccttcattgactcagtgtctttgaattgcaggga 384
Query: 185 tggctttctaccttgattgacagattaggttatatgttcatttgtctcactgtgttgtcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggctttctaccttgattgacagattaggttatatgttcatttgtctcactgtgttgtcc 444
Query: 245 tttccaagattgactctgattttagccacatggatatcaaattatgctcagtgataagat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tttccaagattgactctgattttagccacatggatatcaaattatgctcagtgataagat 504
Query: 305 gatgaaaggggtggggttctcccaaaaggttatttggaaggcttagtctgggttattggg 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatgaaagggatggggttctcccaaaaggttatttggaaggcttagtctgggttattggg 564
Query: 365 tatgcctgccccaaaccagctcaggaaaaataagtctttgtattcttcagagtgctattc 424
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 565 tatgcctgccccaaaccagctcaggaaaactaagtctttgtattcttcagagtgctattc 624
Query: 425 tttgagaatttatgtgaacagaaactgttcatagttaaaagttgttagaggtggaggaag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttgagaatttatgtgaacagaaactgttcatagttaaaagttgttagaggtggaggaag 684
Query: 485 atttgctgttgttatgagatgtggattctgatgtaggggagtaacacagagagttacatt 544
|||||||||||||||||||||||||||||||||||| |||||||||||||||||| ||||
Sbjct: 685 atttgctgttgttatgagatgtggattctgatgtagaggagtaacacagagagttgcatt 744
Query: 545 gaggttgcattggttgtagaggggtgcacgtagacacagtgtgtgcagacaaagacttag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 gaggttgcattggttgtagaggggtgcacgtagacacagtgtgtgcagacaaagacttag 804
Query: 605 gcttctaaggaaagagagaag 625
|||||||||||||||||||||
Sbjct: 805 gcttctaaggaaagagagaag 825
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1025
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1015
Effective search space: 624225
Effective search space used: 624225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
