Query= MSMg01no482_e12.b1 MSMg01no482_e12.b1 CHROMAT_FILE:
MSMg01no482_e12.b1 PHD_FILE: MSMg01no482_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:09 2005
(621 letters)
>mm_chr17_30344002_30345022
Length = 1021
Score = 1106 bits (572), Expect = 0.0
Identities = 612/632 (96%), Gaps = 11/632 (1%)
Strand = Plus / Plus
Query: 1 atgagctggggtcttggcgccccgtggcctcgcctcttcctcctttccccagtgcaccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 atgagctggggtcttggcgccccgtggcctcgcctcttcctcctttccccagtgcaccct 249
Query: 61 tgtccggctggacatcttgctctgagacctctcctctgttgtttcttctcttacgtgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tgtccggctggacatcttgctctgagacctctcctctgttgtttcttctcttacgtgcca 309
Query: 121 gacccgtgccccccttagacctacagccgcctccgcagcctggagggcagcccaggtggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gacccgtgccccccttagacctacagccgcctccgcagcctggagggcagcccaggtggg 369
Query: 181 agccctgagaggaccctggcctctgccctcttggggcgttagaccaggtgacatcacact 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 agccctgagaggaccctggcctctgccctcttggggcgttagaccaggtgacatcacact 429
Query: 241 cggcttttttgtgtgtcacagtttccagggttgcaaagcacccatttccttttttgttgt 300
|||| | |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cggccctcctgtgtgtcacagtttccagggttgcaaagcacccatttccttttttgttgt 489
Query: 301 tgtttgttgttttgtttggaccttattgtcctacttaagtcatttcttttttgtttgttt 360
||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tgtttcttgttttgtttgaaccttattgtcctacttaagtcatttcttttttgtttgttt 549
Query: 361 ttgttttgttttgtttt-----------tttattaggtattttcctcatttacatttcca 409
||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 550 ttgttttgttttgttttgttttgttttttttattaggtattttcctcatttacatttcca 609
Query: 410 atgctatcccaaaagtcccccataccctccccccgcacccattttctgataggaggccta 469
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 610 atgctatcccaaaagtcccccataccctctccccgcacccattttctgataggaggccta 669
Query: 470 ttcacttgtaagtgggacttgatccctgctggagcttgccagggttcctgaactggcgtg 529
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 ttcacttgtaagtgggacttgatccctgctggagcttgccagggttcctgaactggcgtg 729
Query: 530 ggtgcagagccgcatctgtgatccttgagtccctcttcatttgctgcattgagcaaggcc 589
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 ggtgcagagccgcatctgtgatccttgagtccctcttcatttgctgcattgagcaaggcc 789
Query: 590 agcgccaacacatttcccagcggacgtactgc 621
|| ||||||| |||||||||||||||||||||
Sbjct: 790 agtgccaacagatttcccagcggacgtactgc 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space: 617721
Effective search space used: 617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no482_e12.g1 MSMg01no482_e12.g1 CHROMAT_FILE:
MSMg01no482_e12.g1 PHD_FILE: MSMg01no482_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:03:10 2005
(580 letters)
>mm_chr17_30503599_30504578
Length = 980
Score = 775 bits (401), Expect = 0.0
Identities = 416/421 (98%)
Strand = Plus / Minus
Query: 1 attttgtgtttgcagttgtgctcatgagtgagttcacctataatgttcctggacacccta 60
||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||
Sbjct: 421 attttgtgtttgcagttgtactcatgagtgagttcacctagaatgttcctggacacccta 362
Query: 61 gtctgagtttcagtttgtatgatttaatagaatgtgtttttccttccaaatggaggaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 gtctgagtttcagtttgtatgatttaatagaatgtgtttttccttccaaatggaggaatt 302
Query: 121 tatatagtgttttaaaattgactatttgctattccatgcctgtaaaattttctgagctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tatatagtgttttaaaattgactatttgctattccatgcctgtaaaattttctgagctat 242
Query: 181 gttagaaaattattagctaatggttaaatagctaatgtttgggggatggaaaagatggct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gttagaaaattattagctaatggttaaatagctaatgtttgggggatggaaaagatggct 182
Query: 241 cagttgttgaagaacgtgtgctgctcttgtatgtgacccaggtttcagtcctgagcactc 300
|||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 181 cagttgttgaagaacgcgtgctgctcttgtatgtaacccaggtttcagtcctgagcactc 122
Query: 301 gtatgacagctcactgccatcagttacagttccagggacctgacaacatcttggcctctc 360
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gtatgacagctcactgccattagttacagttccagggacctgacaacatcttggcctctc 62
Query: 361 caagtacctgcatacatgtagtgtacttagatggactcaggcccacacatatacataaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 caagtacctgcatacatgtagtgtacttagatggactcaggcccacacatatacataaaa 2
Query: 421 g 421
|
Sbjct: 1 g 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
