Query= MSMg01no483_n24.b1 MSMg01no483_n24.b1 CHROMAT_FILE:
MSMg01no483_n24.b1 PHD_FILE: MSMg01no483_n24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:14 2005
(344 letters)
>mm_chr17_72922162_72922905
Length = 744
Score = 590 bits (305), Expect = e-173
Identities = 332/341 (97%)
Strand = Plus / Minus
Query: 1 taggctggctgacactggactccagctgtccacccgtctctgccttctcagtgcctggat 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 670 taggctggctgacactggactccagccgtccacccgtctctgccttctcagtgcctggat 611
Query: 61 tgccctttctaccatcatgtgaagctccactcacatggattctgtactgaactcctgtcc 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 610 tgccctttctaccatcatgtgaagctccactcacatggattctttactgaactcctgtcc 551
Query: 121 tcatactgccagctctttctccagccctcctaactataaaggtcactagttctctgtcta 180
|||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 550 tcatactgacagctctttctccagccctcctaactataaaggccactagttctctgtcta 491
Query: 181 tgcttatttatacttaagtttccctttgtccaggatatcctctaggcttctcctcctttt 240
| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 490 tacttatttatacttaagtttccctttgtccaggatatcctctaggtttctcctcctttt 431
Query: 241 ttctagacattgctactattaatttattatgggttgctcttccaaatattttctgcgcgt 300
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||
Sbjct: 430 ttctagacattgctactattaattcattatgggttgctcttccaaatattttctgcacgt 371
Query: 301 tgacatagaactcacagaaacctacttacatgatgtaacaa 341
||||||| |||||||||||||||||||||||||||||||||
Sbjct: 370 tgacataaaactcacagaaacctacttacatgatgtaacaa 330
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no483_n24.g1 MSMg01no483_n24.g1 CHROMAT_FILE:
MSMg01no483_n24.g1 PHD_FILE: MSMg01no483_n24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:14 2005
(473 letters)
>mm_chr17_72718469_72719341
Length = 873
Score = 843 bits (436), Expect = 0.0
Identities = 465/476 (97%), Gaps = 4/476 (0%)
Strand = Plus / Plus
Query: 1 aagacatctgttctgttcacaatcaagtgcctagaagaagggccaagtctccttccatca 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 201 aagacatctgttctgctcacaatcaagtgcctagaagaagggccaagtctccttcaatca 260
Query: 61 atcaattatatacacacagccttggaggggggaggtgtgtgagtgcacagagtggtggtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcaattatatacacacagccttggaggggggaggtgtgtgagtgcacagagtggtggtg 320
Query: 121 gacaggcacagaaagatgaattctcatttctctcatctgtggctatcacattatttcaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gacaggcacagaaagatgaattctcatttctctcatctgtggctatcacattatttcaat 380
Query: 181 ctatacaatctgaaggtagcaaaatgagattctgt---tcatctcagaaaaaaattataa 237
|||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 ctatacaatctgaatgtagcaaaatgagattctgtccttcatctcagaaaaaaattataa 440
Query: 238 ttaaaaattacaggcattctaagattaataaggtcagtctcctcatgttataaagggaaa 297
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 ttaaaaattacaggcattctaagattaataaggtcagtctcctcatattataaagggaaa 500
Query: 298 ctgaggcataagacagtcgagtgacttggccatggtagcatggtagacctcaggctagaa 357
|||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 501 ctgaggcataagacagtcgagtgacttggccatggtagcatggtagtcttcaggctagaa 560
Query: 358 attagaaggctgagtcttgagcccagattggacctgcagtgatggtgcagtttctaggaa 417
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 561 attagaaggctgagtcttgagcccagattggacccgcagtgatggtgcagtttctaggaa 620
Query: 418 gagttcatggtgctcgaatgcttgttctcggtgagtgtggatgttgggtggagtgg 473
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 621 gagttcatggtgctcgaatgcttgttctcggtgagtgtggatgt-gggtggagtgg 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 473
Length of database: 873
Length adjustment: 10
Effective length of query: 463
Effective length of database: 863
Effective search space: 399569
Effective search space used: 399569
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
