Query= MSMg01no484_d06.b1 MSMg01no484_d06.b1 CHROMAT_FILE:
MSMg01no484_d06.b1 PHD_FILE: MSMg01no484_d06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:40 2005
(670 letters)
>mm_chr17_14010233_14011302
Length = 1070
Score = 1241 bits (642), Expect = 0.0
Identities = 660/666 (99%), Gaps = 1/666 (0%)
Strand = Plus / Plus
Query: 6 gaattctgcactac-cccatctggtcctgggcttttttttggttgggaaaattttaaaga 64
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcactaaacccatctggtcctgggcttttttttggttgggaaaattttaaaga 264
Query: 65 ctgcttctatttctttaggggttacgggactgtttagatggtttatttgaccctgattta 124
|||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||
Sbjct: 265 ctgcttctatttctttaggggttatgggactgtttagatggtttatctgaccctgattta 324
Query: 125 actttggtatttggtatttgcctagaaaattgtgcatttcatccagattttccagttgtg 184
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 325 actttggtatttggtatttgtctagaaaattgtgcatttcatccagattttccagttgtg 384
Query: 185 ttgagtatataggctttttgtagtaggatctgatgatttttttgaattttctcagtttct 244
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 385 ttgagtatataggctttttgtagtaggatctgatgatttttttgaatttcctcagtttct 444
Query: 245 gttgttatatctcccttttcatttctgattttagaacctttttttttttttcctgtgtag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gttgttatatctcccttttcatttctgattttagaacctttttttttttttcctgtgtag 504
Query: 305 tgacatagaaacagacaccgcctacctcacacttcaccctcatttaaggcctagggatcc 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgacatagaaacagacaccgcctacctcacacttcaccctcatttaaggcctagggatcc 564
Query: 365 aggtgtgtgcatactctgtagtcatacattatgtggcttctgggagttctgcgtaatttc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aggtgtgtgcatactctgtagtcatacattatgtggcttctgggagttctgcgtaatttc 624
Query: 425 ttctgttgaattatctcctcctacattgcatactgacttgagaggttggtgggccaaatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 ttctgttgaattatctcctcctacattgcatactgacttgagaggttggtgggccaaatg 684
Query: 485 tattctgtgaatctcagttcagaatctcctggctgtgttgtctcctatatttcagagaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tattctgtgaatctcagttcagaatctcctggctgtgttgtctcctatatttcagagaga 744
Query: 545 cagaaaagatggatggtgtggtaaatatttgttgtgttggtggtgttgttaaaggtaaag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 cagaaaagatggatggtgtggtaaatatttgttgtgttggtggtgttgttaaaggtaaag 804
Query: 605 gaatgcagctgagggtagaattcagttactttaccaacctgtctgttggaataacattaa 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 gaatgcagctgagggtagaattcagttactttaccaacctgtctgttggaataacattaa 864
Query: 665 tttgag 670
||||||
Sbjct: 865 tttgag 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no484_d06.g1 MSMg01no484_d06.g1 CHROMAT_FILE:
MSMg01no484_d06.g1 PHD_FILE: MSMg01no484_d06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:05:40 2005
(653 letters)
>mm_chr17_14116455_14117507
Length = 1053
Score = 1154 bits (597), Expect = 0.0
Identities = 639/653 (97%)
Strand = Plus / Plus
Query: 1 attcatccgtagggaaataacaccaggggccatgctggcttgtatttctaggtctctact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcatccgtagggaaataacaccaggggccatgctggcttgtatttctaggtctctact 260
Query: 61 atgccacattccttccctggtccctctagagctacacacaagcacacacagtgaacacac 120
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 261 atgccacattccttccctggtccctctagagctacacacaatcacacacagtgaacacac 320
Query: 121 agtgctccctgcttcatattctgagagaaaaaggggaatactaaaggctgccctgcttat 180
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 agtgctccctgcttcatattctgagagaaaaaggggaagactaaaggctgccctgcttat 380
Query: 181 tacactggccccaatttctgctttacttcttcttttatgttgtaaaatcctaaaggaaag 240
||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 381 tacactggctccaatttctgctttacttcttcttttatgttttaaaatcctaaaggaaag 440
Query: 241 aatttgtttcttcttgactatgcaatatcagtacttatgctgacccaatggcccgtagtc 300
|||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||
Sbjct: 441 aatttgtttcttcttgactatgcaatatcagtacttatcctgacccaatgtcccgtagtc 500
Query: 301 ctcctcctcattaatactcctgaaaatcaacaccatcttaggatgggtaattaaactgca 360
|||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 501 ttcctcctcattactactcctgaaaatcagcaccatcttaggatgggtaattaaactgca 560
Query: 361 atgacttgggtgcattttcagtggcactatcaagaatgttaaaattacatgaaggacaat 420
|||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||
Sbjct: 561 atgacttgggtggattttcagtggtactatcaagaatgttaaaattacatgaaggaccat 620
Query: 421 tgcttgtataacactttagggagaaaccaaacgaaccttgctcagttacagcaagagcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcttgtataacactttagggagaaaccaaacgaaccttgctcagttacagcaagagcct 680
Query: 481 gtacaatgaaatgaccatggtgactttatccagggaatgaatgcaaatgttccataacag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gtacaatgaaatgaccatggtgactttatccagggaatgaatgcaaatgttccataacag 740
Query: 541 atcaaagtcattaattatggacattctgtagtaaaagtagtgtatcagtttcttttttaa 600
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 741 atcaaagtcattaattatggacattctgtagtaaaaatagtgtatcagtttcttttttaa 800
Query: 601 tgactacttaattaaagaaacagttactaacacaaaaggctatttaacataat 653
|||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tgactacttaattatagaaacagttactaacacaaaaggctatttaacataat 853
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space: 670649
Effective search space used: 670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
