Query= MSMg01no485_f05.b1 MSMg01no485_f05.b1 CHROMAT_FILE:
MSMg01no485_f05.b1 PHD_FILE: MSMg01no485_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:14 2005
(184 letters)
>mm_chr17_88399984_88400568
Length = 585
Score = 269 bits (139), Expect = 8e-77
Identities = 175/197 (88%), Gaps = 19/197 (9%)
Strand = Plus / Plus
Query: 6 gaattccccctat--tcgtgaaatgatttttaagaaaatcatatacttaataaaacttat 63
||||||||||||| | |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 206 gaattccccctataat-gtgaaatgatttttaagataatcatatacttaataaaacttat 264
Query: 64 tttacaatctgtggtaatgtgaaaatcatttagctttgggcttaaaagtttcttttctt- 122
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tttacaatctgtggtaatgtgaaaatcatttagctttgggcttaaaagtttcttttcttt 324
Query: 123 ----------cttctttttttttttttttttttt-----gggttttttgagacagggttt 167
|||||||||||||||||||||||| || ||||||||||||| ||||
Sbjct: 325 tcttcttcttcttctttttttttttttttttttttttttggtttttttgagacagtgttt 384
Query: 168 ctttgtatagctctggc 184
|||||||||||||||||
Sbjct: 385 ctttgtatagctctggc 401
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 585
Length adjustment: 8
Effective length of query: 176
Effective length of database: 577
Effective search space: 101552
Effective search space used: 101552
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no485_f05.g1 MSMg01no485_f05.g1 CHROMAT_FILE:
MSMg01no485_f05.g1 PHD_FILE: MSMg01no485_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:07:14 2005
(121 letters)
>mm_chr17_88459955_88460474
Length = 520
Score = 221 bits (114), Expect = 2e-62
Identities = 117/118 (99%), Gaps = 1/118 (0%)
Strand = Plus / Minus
Query: 4 ttccctttggctctacatggatatttgttttaagttctaaaaggatttagcttttgtaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttccctttggctctacatggatatttgttttaagttctaaaaggatttagcttttgtaac 261
Query: 64 atgtcccacagaattcagtctttttattcttagaacttaggttttacnttttttccta 121
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 260 atgtcccacagaattcagtctttttattcttagaacttaggttttac-ttttttccta 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 121
Length of database: 520
Length adjustment: 8
Effective length of query: 113
Effective length of database: 512
Effective search space: 57856
Effective search space used: 57856
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
