Query= MSMg01no486_c12.b1 MSMg01no486_c12.b1 CHROMAT_FILE:
MSMg01no486_c12.b1 PHD_FILE: MSMg01no486_c12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:22 2005
(263 letters)
>mm_chr17_66911332_66911994
Length = 663
Score = 451 bits (233), Expect = e-131
Identities = 260/279 (93%), Gaps = 16/279 (5%)
Strand = Plus / Minus
Query: 1 ccagaactacacagtgaaaagctatttcaaaa----------------atacatacatac 44
|||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 541 ccagaactacacagtgaaaagctatttcaaaaatacatacatacatacatacatacatac 482
Query: 45 atacatacatacatacatcaaataatttttaaaatccaaagaaaaaagcctacgtatgga 104
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 481 atacatacatacatacatcaaataatttttaaaatccaaagaaaaaagcctacatatgga 422
Query: 105 aaccaaacaggagaacaaaccacctgagagcatgataggacatttatcatttccctagag 164
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 421 aaccaaacaggagaacaaaccacctgagagcatgataggaaatttatcatttccctagag 362
Query: 165 ttagttctctaaacattcggttgtttctaccacacttcttgcttgggttaaacagcagtt 224
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 361 ttagttctctaaacattcggttgtttctaccacacttcttgcttgagttaaacagcagtt 302
Query: 225 gctgcggctcctgggtttttgtgaggcactgctaacatg 263
|||||||||||||||||||||||||||||||||||||||
Sbjct: 301 gctgcggctcctgggtttttgtgaggcactgctaacatg 263
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 263
Length of database: 663
Length adjustment: 9
Effective length of query: 254
Effective length of database: 654
Effective search space: 166116
Effective search space used: 166116
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no486_c12.g1 MSMg01no486_c12.g1 CHROMAT_FILE:
MSMg01no486_c12.g1 PHD_FILE: MSMg01no486_c12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:22 2005
(149 letters)
>mm_chr17_66730771_66731319
Length = 549
Score = 209 bits (108), Expect = 6e-59
Identities = 135/144 (93%)
Strand = Plus / Plus
Query: 3 ggaacccagagtactgctcaggacacgttaagaaagtcagctaccttttcagcctgggtc 62
|||| |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 203 ggaatccagagtactgcccaggacacgttaagacagtcagctaccttttcagcctgggtc 262
Query: 63 ccgggccttcaagtaatctatactatcttggcttacgggattgttgtatcttttttgttc 122
||||||||||| |||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 263 ccgggccttcaggtaatctatactatcttggcttaccggattgttgtatcttttgtgttc 322
Query: 123 tcgatatatgaacagtgaatttca 146
|||||| |||||||||||||||
Sbjct: 323 aggatatacgaacagtgaatttca 346
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 149
Length of database: 549
Length adjustment: 8
Effective length of query: 141
Effective length of database: 541
Effective search space: 76281
Effective search space used: 76281
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
