Query= MSMg01no486_j23.b1 MSMg01no486_j23.b1 CHROMAT_FILE:
MSMg01no486_j23.b1 PHD_FILE: MSMg01no486_j23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:59 2005
(607 letters)
>mm_chr17_89649135_89650141
Length = 1007
Score = 1127 bits (583), Expect = 0.0
Identities = 601/607 (99%)
Strand = Plus / Plus
Query: 1 gaattctccgtgggatctctctgagaattgtcctttatcaatgaacaatttctaaagatg 60
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 gaattctccgtgggaagtctctgagaattgttctttatcaatgaacaatttctaaagatg 260
Query: 61 atccatcccacaaagtctatgttctaatgatttctgatcattttatacaaaaagcacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atccatcccacaaagtctatgttctaatgatttctgatcattttatacaaaaagcacaat 320
Query: 121 cagcttaagaagaatttcatattctgtggctctcgtgggaaagatgtgagaatttgactg 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 cagcttaagaagaatttcatattctgtggctctcttgggaaagatgtgagaatttgactg 380
Query: 181 gttttgaaatatatagttgaaagttactcttgaaatataaaggacaattcatcttacttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gttttgaaatatatagttgaaagttactcttgaaatataaaggacaattcatcttacttt 440
Query: 241 tttaaatgagtgaactctgaaagataacaagcctgaaatggaattggggtttttgagcct 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 441 tttaaatgagtgaactctgaaagataacaagcctgaaatggagttggggtttttgagcct 500
Query: 301 aaatggatggacaggtgagttcctccaattcactacagattttggatgctgccaatttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaatggatggacaggtgagttcctccaattcactacagattttggatgctgccaatttct 560
Query: 361 catcttattggcatattacattggggcaattatgtgaatctggttggacctggtcagcct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catcttattggcatattacattggggcaattatgtgaatctggttggacctggtcagcct 620
Query: 421 aaggtgtatgctaattctcagctttatttctctttctaaaaaaaaatctaaaagatcagc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aaggtgtatgctaattctcagctttatttctctttctaaaaaaaaatctaaaagatcagc 680
Query: 481 ttttgactaagtctgatcatttttcactcaatccacttaggtatctccattaggtgagat 540
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 ttttgactaagtctgatcatttttcactcaatccacttagctatctccattaggtgagat 740
Query: 541 atttcacattaaacaaagtatctataaagaaatactacagtatttttatgaaaatgactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 atttcacattaaacaaagtatctataaagaaatactacagtatttttatgaaaatgactg 800
Query: 601 cttaaga 607
|||||||
Sbjct: 801 cttaaga 807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 607
Length of database: 1007
Length adjustment: 10
Effective length of query: 597
Effective length of database: 997
Effective search space: 595209
Effective search space used: 595209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no486_j23.g1 MSMg01no486_j23.g1 CHROMAT_FILE:
MSMg01no486_j23.g1 PHD_FILE: MSMg01no486_j23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:08:59 2005
(617 letters)
>mm_chr17_89801853_89802869
Length = 1017
Score = 714 bits (369), Expect = 0.0
Identities = 384/389 (98%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 1 cttccctgtctgtattttgatattgttgtattgatttgtgtttgtttaatgtaatgtcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cttccctgtctgtattttgatattgttgtattgatttgtgtttgtttaatgtaatgtcat 329
Query: 61 ttataattttgccattttcttcccttctatttttctttcaaatactggccaaaaacctaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 ttataattttgccattttcttcccttctatttttctttcaaatactggccaaaaacctaa 269
Query: 121 gtttacttttctctgactctttggactttctcatttatttttggttttggttttgttttg 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 gtttacctttctctgactctttggactttctcatttatttttggttttggttttgttttg 209
Query: 181 ttgttgttttttgttttttcgagacagggtttctctgtgtagccttgtctgtcctggaac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 ttgttgttttttgttttttcgagacagggtttctctgtgtagccttgtctgtcctggaac 149
Query: 241 tcactttgtatactcaggctggcctggaactcagagatctgcctgtctctgcctcccaag 300
|||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 148 tcactttgtagac-caggctggcctggaactcagagatctgcctgtctctgactcccaag 90
Query: 301 taccggaattaaaggcatgagccaccacgcctggctaggactttctcatctcacaccagt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 89 taccggaattaaaggcatgagccaccacgcctggctaggactttctcatctcacaccagt 30
Query: 361 cagaatggctaagatcaaaaattcaggtg 389
||||||||||||||| |||||||||||||
Sbjct: 29 cagaatggctaagataaaaaattcaggtg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
