Query= MSMg01no488_g04.b1 MSMg01no488_g04.b1 CHROMAT_FILE:
MSMg01no488_g04.b1 PHD_FILE: MSMg01no488_g04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:17 2005
(655 letters)
>mm_chr17_68821498_68822552
Length = 1055
Score = 1098 bits (568), Expect = 0.0
Identities = 580/584 (99%)
Strand = Plus / Minus
Query: 1 tgggtagttgaggatgggtcatggtaagtaattatgtaatgttcttttatctctagatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 tgggtagttgaggatgggtcatggtaagtaattatgtaatgttcttttatctctagatca 525
Query: 61 cttagaataatttgctttctggttatatcttactcttcttccaactctatctccttatct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 524 cttagaataatttgctttctggttatatcttactcttcttccaactctatctccttatct 465
Query: 121 tgttttctgttaatcctcctagaaggaagtctgcattaaatctagctgtggagactggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 464 tgttttctgttaatcctcctagaaggaagtctgcattaaatctagctgtggagactggaa 405
Query: 181 aatcttcctggtttgggtcccagagatgatcctgtcttgacacagtgaaatcaggatggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 404 aatcttcctggtttgggtcccagagatgatcctgtcttgacacagtgaaatcaggatggc 345
Query: 241 ctgtgaagcatatgttgactaccagaatgtctcaagggagttaaatcaccataacacaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ctgtgaagcatatgttgactaccagaatgtctcaagggagttaaatcaccataacacaat 285
Query: 301 gagcttcatgaagcagttagggctaaagtcatataatttctagacccacagtgaattctg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gagcttcatgaagcagttagggctaaagtcatataatttctagacccacagtgaattctg 225
Query: 361 taagaactggagtcaaaacttgaaaagttatgctcaccagtgcaataatggaacaaatgt 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 224 tgagaactggagtcaaaacttgaaaagttatgctcaccagtgcaataatggaacaaatgt 165
Query: 421 tattggctaactactaattagatttaaggcccatcctacagaagaaatgcatagtccagc 480
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 164 tattggctaactactaattagatttaaggtccatcctacagaagaaatgcatagtccagc 105
Query: 481 tataaatatgactgagaaccctttgttgaggagttcacaggcgacagaagtgaatctaaa 540
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 104 tataaatatgactgagaaccctttgttgaggagttcacaggcaacagaagtgaatctaaa 45
Query: 541 attattttgctagacgaacaacacagtatcgaactgccctctaa 584
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 44 attattttgctagacaaacaacacagtatcgaactgccctctaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1055
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1045
Effective search space: 674025
Effective search space used: 674025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no488_g04.g1 MSMg01no488_g04.g1 CHROMAT_FILE:
MSMg01no488_g04.g1 PHD_FILE: MSMg01no488_g04.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:17 2005
(355 letters)
>mm_chr17_68672200_68672950
Length = 751
Score = 625 bits (323), Expect = 0.0
Identities = 346/355 (97%), Gaps = 4/355 (1%)
Strand = Plus / Plus
Query: 1 gaagctgactgagtttgcggagcaagtgaaaggatatcatatcggccggatccacaggag 60
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 201 gaagctgattgagtttgcggagcaagtgaaaggatat---atcggccggatccacaggag 257
Query: 61 catgagaattttcgctttcttcttggtatacgtctctttcatttgattccgttctaaaac 120
|||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||
Sbjct: 258 catgagaattttcgctttcttcttggtatatgtctcttccatttgattccgttctaaaac 317
Query: 121 tttatatgcttgtgaggaatctgattcgaaggtggtaacatcatttggaaccaccgaggg 180
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tttatatgcttgcgaggaatctgattcgaaggtggtaacatcatttggaaccaccgaggg 377
Query: 181 aaacactttacaggctttgcggtgagaaggaagagtcccggcccagcttgctacaaggcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaacactttacaggctttgcggtgagaaggaagagtcccggcccagcttgctacaaggcc 437
Query: 241 ttgactcagccgcgggagcttcagtttttcttttgctgcaaaggaaggaggtcagaaaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 ttgactcagccgcgggagcttcagtttttcttttgctgcaaaggaaggaggtcagaaaag 497
Query: 301 agtcaaatcgctgttttaaaaaaaacatgtttccgtcgaacacaggtttacttag 355
||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 498 agtcaaatcgctgtta-aaaaaaaacatgtttccgtcgaacacaggtttacttag 551
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 355
Length of database: 751
Length adjustment: 9
Effective length of query: 346
Effective length of database: 742
Effective search space: 256732
Effective search space used: 256732
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
