ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCCAGAATTTCCAGACAGGGAGACATCTGAGTTCAAGGTCATCTGGGGTT
AAAGGCATGGTGGCATACACCTTTAATCTGGGCTACACCATCTGCTGGAG
ACCTACATAAAAACATTGAAAGAAGGAAGATTTATACTCATTCTCTCTTT
ACCTGCTTGCCTTGTGGGACTGAGCAACTGCTAGATCCTTGGACTTCCAT
TCGCAGCTGCTGCTGACCATTGTTGCGTGTTGGATTGCAGACTGTAAGTC
ATCAACAAATTCTTTTACTATATAGAGACTACCCATAAGATGATAGTCTC
ATAGATGACTCTAGAGAACCCTGATTATTACATTGAATAAAGGATTTTCT
TTCAGTGTATCTTTTTAAAAAAAATTATCTTTCAGAAATAAGTATTATAT
AATAATTTATGAAACAAAACCTAATTAGATGTCTAAGTAGGAGCACCAAA
TACATTCTATCATTGAAGCAAAGTATTAAAACTGAGATAAGAAAGCATCA
TCACCCTTTGTTGTTAAGAGTAGATAAAGAAGCCATGGATTTGAATTAAA
GCAGGGAGGGTTCTGGGAACATTGGCAGGGAGAAATGGGAAGGGAGCTGT
GATGCAATTGCATTCTCTGTCAGTCATCTTGTGCTGACTCACACCCACCC
CCATGGTCTTGTCCACATTTTAATGAATTCATGCCAGCTTN

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXTTACCCGAGAGAATCTCACCTGAGGAATACCGAATGGCA
GAGAAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAA
ATCCGTCTGGCGGTTTTTTTTATTTATTGGACATAGTACTACCGGAGGAT
CCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAA
GAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCA
GAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAA
ATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGA
ATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGA
GTGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATA
AGTGGATATTAGCCCCAAACCTAGGATACCCAAGATATAAAATATAATTT
GCTAAACACATGANACTCAAGAAGAATGAAGACTGAAGTGTGGACACTAT
GC

Query= MSMg01no488_l11.b1 MSMg01no488_l11.b1 CHROMAT_FILE:
MSMg01no488_l11.b1 PHD_FILE: MSMg01no488_l11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:11:43 2005
         (669 letters)



>mm_chr17_41427381_41428449
          Length = 1069

 Score = 1031 bits (533), Expect = 0.0
 Identities = 631/669 (94%), Gaps = 11/669 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggagacatctgagttcaaggtcatctggggttaaaggcatggtggcatacacctttaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 212 agggagacatctgagttcaaggtcatctggggttaaaggcatggtggcaaacacctttaa 271

                                                                       
Query: 61  tctgggctacaccatctgctggagacctacataaaaacattgaaagaaggaagatttata 120
           |||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tctgggatacaccttctgctggagacctacataaaaacattgaaagaaggaagatttata 331

                                                                       
Query: 121 ctcattctctctttacctgcttgccttgtgggactgagcaactgctagatccttggactt 180
           |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||
Sbjct: 332 ctcattctctctttacctgcttgccttgcgggactgagcaactgctagatacttggactt 391

                                                                       
Query: 181 ccattcgcagctgctgctgaccattgttgcgtgttggattgcagactgtaagtcatcaac 240
           |||||| ||||| || ||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 392 ccattcacagctactactgaccattgttgggtgttggattgcagactgtaagtcatcaac 451

                                                                       
Query: 241 aaattcttttactatatagagactacccataagatgatagtctcatagatgactctagag 300
           |||||||||||||||||||||||||||||||||    |  |||     |||| |||||||
Sbjct: 452 aaattcttttactatatagagactacccataag----t--tct-----atgattctagag 500

                                                                       
Query: 301 aaccctgattattacattgaataaaggattttctttcagtgtatctttttaaaaaaaatt 360
           |||||||||||||||| ||| ||||||||||||||||||| ||||||||| |||||||||
Sbjct: 501 aaccctgattattacactgagtaaaggattttctttcagtatatcttttttaaaaaaatt 560

                                                                       
Query: 361 atctttcagaaataagtattatataataatttatgaaacaaaacctaattagatgtctaa 420
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 atctttcagaaataagtattatataataatttatgaaacaaagcctaattagatgtctaa 620

                                                                       
Query: 421 gtaggagcaccaaatacattctatcattgaagcaaagtattaaaactgagataagaaagc 480
            ||| |||||||||||||||||||| |||||||| |||||||||||||| ||| ||||||
Sbjct: 621 atagtagcaccaaatacattctatcgttgaagcagagtattaaaactgacatatgaaagc 680

                                                                       
Query: 481 atcatcaccctttgttgttaagagtagataaagaagccatggatttgaattaaagcaggg 540
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 681 atcatcaccctttgttgttaagagtagacaaagaagccatggatttgaattaaagcaggg 740

                                                                       
Query: 541 agggttctgggaacattggcagggagaaatgggaagggagctgtgatgcaattgcattct 600
           |||||||||||||||| ||||||||||||||||||||| | ||||||| |||||||||||
Sbjct: 741 agggttctgggaacatcggcagggagaaatgggaagggcgttgtgatgtaattgcattct 800

                                                                       
Query: 601 ctgtcagtcatcttgtgctgactcacacccacccccatggtcttgtccacattttaatga 660
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 801 ctgtcagtcatcttgtgctgactcacactcacccccatggtcttgtccacattttaatga 860

                    
Query: 661 attcatgcc 669
           |||||||||
Sbjct: 861 attcatgcc 869


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1069
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1059
Effective search space:   697881
Effective search space used:   697881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)