Query= MSMg01no489_e01.b1 MSMg01no489_e01.b1 CHROMAT_FILE:
MSMg01no489_e01.b1 PHD_FILE: MSMg01no489_e01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:25 2005
(645 letters)
>mm_chr17_29279346_29280390
Length = 1045
Score = 1208 bits (625), Expect = 0.0
Identities = 637/641 (99%)
Strand = Plus / Minus
Query: 5 gaattctgactttctgagaggggatgggattggggggcgggacacctggctggccacagg 64
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 845 gaattctgactttctgagaggggatgggatgggggggcgggacacctggctggccacagg 786
Query: 65 tgcaggcttgctctgtctgagtctatgctatggaattgtgtggaactgacacacacagag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 tgcaggcttgctctgtctgagtctatgctatggaattgtgtggaactgacacacacagag 726
Query: 125 agcatcagagggctggagagatagctcagggcttcagcacttgccatgcaagcctgaaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 725 agcatcagagggctggagagatagctcagggcttcagcacttgccatgcaagcctgaaga 666
Query: 185 caggggttcagataaccagaagccagcataattgctgggtgggcgtggcagcctccaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 caggggttcagataaccagaagccagcataattgctgggtgggcgtggcagcctccaaag 606
Query: 245 gaagagacattggtaagccctggatttgctgagagattctgtctttgtgaatgaggcaga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 gaagagacattggtaagccctggatttgctgagagattctgtctttgtgaatgaggcaga 546
Query: 305 agaggcctggaggacctttcccaaagccatgtgcctccacacacacctgagtgcactcac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 agaggcctggaggacctttcccaaagccatgtgcctccacacacacctgagtgcactcac 486
Query: 365 gcaaacatgctagaacccagcctcagggtggtaggtacaaagacaggccaatctctgtgc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gcaaacatgctagaacccagcctcagggtggtaggtacaaagacaggccaatctctgtgc 426
Query: 425 atgagtctctgtgcatgcgtctttgggtatgcatctttcttaccccgtccctgtgagcac 484
|||||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 425 atgagtttctgtgcatgcgtctttgggtatgcgtctttcttaccccgtccctgtgagcac 366
Query: 485 cggagctaaatctatgttaaactctcaataatatgcctcctcctgaaagccatccccttg 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 cggagctaaatctatgttaaactctcaataatatgcctcctcctgaaagccatccccttg 306
Query: 545 gcaaagtcaatcatcgtacctgcacctgagtggaagtctcagaacgagccccagactctg 604
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcaaagtcaatcatcatacctgcacctgagtggaagtctcagaacgagccccagactctg 246
Query: 605 ttcccacagaggctgacagatctttttgccacatgataaga 645
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ttcccacagaggctgacagatctttttgccacatgataaga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1045
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1035
Effective search space: 657225
Effective search space used: 657225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_e01.g1 MSMg01no489_e01.g1 CHROMAT_FILE:
MSMg01no489_e01.g1 PHD_FILE: MSMg01no489_e01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:25 2005
(603 letters)
>mm_chr17_29087926_29088929
Length = 1004
Score = 1129 bits (584), Expect = 0.0
Identities = 599/604 (99%), Gaps = 2/604 (0%)
Strand = Plus / Plus
Query: 1 actttgtagacccagtttcctgactggattccctgacttcccttagtgacaggtggtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actttgtagacccagtttcctgactggattccctgacttcccttagtgacaggtggtatg 260
Query: 61 ggggaaactgggcaaggtagacccgtccccctcc-cccctccaccccccagaagcaacat 119
|||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 261 ggggaaactgggcaaggtagacccgtccccctcctcccctcccccccccagaagcaacat 320
Query: 120 aagccaaataagggggacctcgatttcctgatcctcctgcctctacctcccaagtgctag 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagccaaataagggggacctcgatttcctgatcctcctgcctctacctcccaagtgctag 380
Query: 180 gattaatgctgtgcacacaggtattccctatatttttttgcgtggttttattagtttatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gattaatgctgtgcacacaggtattccctatatttttttgcgtggttttattagtttatt 440
Query: 240 tatgttttcagcagcagttttaaagtagaataatgtcagcacttgggagacagggacagg 299
|| || |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ta-gtgctcagcagcagttttaaagtagaataatgtcagcacttgggagacagggacagg 499
Query: 300 aggatgaggagtccaaagccatccttggctacacagcaaattcaacatgggctgcggcgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 aggatgaggagtccaaagccatccttggctacacagcaaattcaacatgggctgcggcgt 559
Query: 360 cacatctcaataaaatgaactcggacctggagacgtagctcaactggtagaataatggcc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cacatctcaataaaatgaactcggacctggagacgtagctcaactggtagaataatggcc 619
Query: 420 tagggtgcatgaagccctgggttacaccagagcccttcataattcggctacggtagggct 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tagggtgcatgaagccctgggttacaccagagcccttcataattcggctacggtagggct 679
Query: 480 tgtctgtaaccctatccatcactcacatggtgaaggtcggatcagaggtgcaaggccata 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 tgtctgtaaccctatccatcactcacatggtgaaggtcggatcagaggtgcaaggccata 739
Query: 540 ctgggataaaggagactgtctcaaaaaacaaagaacaccccatgtattaagagtggagag 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ctgggataaaggagactgtctcaaaaaacaaagaacaccccatgtattaagagtggagag 799
Query: 600 ccag 603
||||
Sbjct: 800 ccag 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1004
Length adjustment: 10
Effective length of query: 593
Effective length of database: 994
Effective search space: 589442
Effective search space used: 589442
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
