Query= MSMg01no489_f07.b1 MSMg01no489_f07.b1 CHROMAT_FILE:
MSMg01no489_f07.b1 PHD_FILE: MSMg01no489_f07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:31 2005
(630 letters)
>mm_chr17_54458833_54459861
Length = 1029
Score = 1056 bits (546), Expect = 0.0
Identities = 609/634 (96%), Gaps = 12/634 (1%)
Strand = Plus / Minus
Query: 4 ggaattcttctccatattaatggggtatctagatagtcttgaacctaacccctcctgggt 63
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 770 ggaattcttctccatattaatggggtatccagatagtcttgaacctaacccctcctgggt 711
Query: 64 attcttttgctacaaaggtatataatccctggttcaccccaaataaagtgtaagcattca 123
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 710 attcttttgccacaaaggtatataatccctggttcaccccaaataaagtgtaagcattca 651
Query: 124 cattcatcatcaaaataatt-----aaaaaataaaaaccctaata-cgaacaatcaagga 177
|||||||||||||||||||| |||||| ||||||||||| | ||||||||||||||
Sbjct: 650 cattcatcatcaaaataatttaaaaaaaaaaaaaaaaccctaa-accgaacaatcaagga 592
Query: 178 tcgtctcagagaactgctttattagtgggtgccaagagaaaggccttcaccttaaaaagc 237
|||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct: 591 tcgtctcagagaactgctttattaatgggtgccaagagaaaggccttcatcttaaaaagc 532
Query: 238 cacctccaaaactcttgaggaatgctatttttcctcccatccctctgggactctcagcat 297
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 531 cacctccaaaactcttgaggaaggctatttttcctcccatccctctgggactctcagcat 472
Query: 298 ctgctccttactaggccagatcatattcatcccgtgctctgccttcctcttcctgcctgg 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 ctgctccttactaggccagatcatattcatcccgtgctctgccttcctcttcctgcctgg 412
Query: 358 tacttagcaccttgagggggaacatataacatg-gacccctaactaaaacaggaagaata 416
|||||||||||||||||||||||||| ||| | || |||||||||||||||||||||||
Sbjct: 411 tacttagcaccttgagggggaacatagaac--gagaaccctaactaaaacaggaagaata 354
Query: 417 agtgattttttgcctagaggagtagcctctggaaagttgctcttagtccagtaaactgat 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 agtgattttttgcctagaggagtagcctctggaaagttgctcttagtccagtaaactgat 294
Query: 477 ctgcacacatgccaatataagcagtaccaattgtactcagtgtcttataaggaaaataaa 536
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 293 ctgcacacatgccaatataagcagtaccaattgtactcagtgtcttataaggaaaa--aa 236
Query: 537 aagacatgaggctaggaaggttatgttttgggagccagaatgaaaggaagggttggagaa 596
|||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 235 aagacatgaggctaagaagggtatgttttgggagccagaatgaaaggaagggttggagaa 176
Query: 597 atgtgagcaagatacattgtacgcatatatgaaa 630
|| |||||||||||||||||| | ||||||||||
Sbjct: 175 atatgagcaagatacattgtatgtatatatgaaa 142
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1029
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1019
Effective search space: 631780
Effective search space used: 631780
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no489_f07.g1 MSMg01no489_f07.g1 CHROMAT_FILE:
MSMg01no489_f07.g1 PHD_FILE: MSMg01no489_f07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:12:31 2005
(553 letters)
>mm_chr17_54241462_54242414
Length = 953
Score = 1054 bits (545), Expect = 0.0
Identities = 551/553 (99%)
Strand = Plus / Plus
Query: 1 acagatagccaacagctttagggacagcccatgctatagttgtttcggggaaccacacaa 60
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 acagatagccaacagctttagggacagcccctgctatagttgtttcggggaaccacacaa 260
Query: 61 agactaagctgcacatctaaaatatttgtgccaggtctcaagttgggcctgttattggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agactaagctgcacatctaaaatatttgtgccaggtctcaagttgggcctgttattggat 320
Query: 121 ggccattctctcagtcattgttccgtctttgtccctgcatttcttttagacaggaaaact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggccattctctcagtcattgttccgtctttgtccctgcatttcttttagacaggaaaact 380
Query: 181 ttggggccaacagttttgggcttgacatcctatctctttgctgggagttttgcctggcta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttggggccaacagttttgggcttgacatcctatctctttgctgggagttttgcctggcta 440
Query: 241 catgaggttgcctcttcaggttccatatccccactgttatgcatctcggttaagttcatc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catgaggttgcctcttcaggttccatatccccactgttatgcatctcggttaagttcatc 500
Query: 301 catagggcttttagaattgttagcacctcttcccccgaccccacccctggccattcttgc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catagggcttttagaattgttagcacctcttcccccgaccccacccctggccattcttgc 560
Query: 361 tttcaaattttcattgaaaagtcaagtgttattctgatagacctccctttgtatgtaact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tttcaaattttcattgaaaagtcaagtgttattctgatagacctccctttgtatgtaact 620
Query: 421 ttgtcctttcctcttatagcttttatataattgatataattataaatacaagtacatatt 480
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttgtcctttcctcttagagcttttatataattgatataattataaatacaagtacatatt 680
Query: 481 tatgtaatatgctctttttgctatgtacattcaatgcttttattattatgtgatacaaaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tatgtaatatgctctttttgctatgtacattcaatgcttttattattatgtgatacaaaa 740
Query: 541 atgttttttccta 553
|||||||||||||
Sbjct: 741 atgttttttccta 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space: 512049
Effective search space used: 512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
