XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCT
CAAACAATATCCAATAATATTCACATATAACAGGCAACAGTCATTCAACT
AACCCGCCTTTGCCTTGTACAGATTCCTGTATCTTGCATAGAGGAGGTTT
GGTTTATTAAGATTTATGGGAGAGAGCCAATCCCTCACACTATTAATGAT
ATCTTGCTATGCTTGCAGAAAGGAGCCTAGCATAACTGGCTTCTTCCAGC
AGCTGATGGAAACAGTTGCAGAGACTCACAGCCAAACATTACACTCAGCT
CAGAGTCTTGTATAATAATTGGGGGAAGGAATCAGGAAACCAGGGAGGTT
AAGGACACCAAAAGAAGACATACAGAGTCTACTAACCTTTTCCCATGGGT
GCTCAACCAGAGAACATGCATGGACTGCACATAGCACCCCCCCTACATAT
TTATAGTTGATGTGCAACTTGGTCTTCATGTGAGTTGCATAACAATTGAA
GCATGCTTTTTCTGATGATGTTGCCTGCCTTGGATCACCTTCTTGTAGCT
GGGTTGCCTTGACTGGCCTCAGTGGGATGCTACATCCACCCTAGTAGTGA
CACGAATGACAGGCCAAAAGCCTGGATACAGTCCCAAGGCAAAAAGTTCA
CGGAAACTTAGTCTCCTGGAACTGTGGCATCCCATAGCGTGTATGCTCCA
AACTTGTCCTTGTGAATGGATCTG

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXTGATTCAGACTCAGAAGTGAGATAAGTCTT
CTATCTTATTAGGAAAGCTTCATCAGATAACTTGTCTTCCATCATTTGTT
TAATCCTATTCAACACTAATAATTGGAAGAACATTAGGCACAGGTGGCTC
TAGTACCTACATTCCTATGTAAACTGGACACATGGCAACGTAATGGAAGA
AAACATATTTTAACCAGTCCTCACCTAGTCTCTAGCCAGGGACTTTCTGT
AGGAATGACCCATTTTTTGTCTGCTGTAATATTTCTTTTACCTTGAATTT
TCCTCTGCTTGTAAATGCCTTCCTATCCCTCAACTCAATCCCTTTGCCAG
GCCCAGAAGAGCTGCCTTCTGTAGCTTCCCAATTTATGAAGTCTTCTATT
CCCAGTCGTTAAATGTTTAATGTGTCTAAGTTTATCTTTTAATGGTTCAT
AATGATAATTTTTATATATTTAATTAATTATTTTATTTATTTATTTACAT
TCCAGATGTTGCCCCTACCTCTTAGTGCCCCCCACCCCAGACATAGTTCC
TCATCCCATTCTTCATCACCCTTGCCTTTAAAAGGATACTCTCCCTCCCA
CTCCCATCACCTCAGGCATTCCCCTTCTCTGGGGCCTGAACTCTCTCCAA
GATTAGGCACATCCTCTTTCACTGAGG

Query= MSMg01no492_g18.b1 MSMg01no492_g18.b1 CHROMAT_FILE:
MSMg01no492_g18.b1 PHD_FILE: MSMg01no492_g18.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:16:39 2005
         (619 letters)



>mm_chr17_89914938_89915956
          Length = 1019

 Score = 1158 bits (599), Expect = 0.0
 Identities = 615/621 (99%), Gaps = 2/621 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ataatattcacatataacaggcaacagtcattcaactaacccgcctttgccttgtacaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataatattcacatataacaggcaacagtcattcaactaacccgcctttgccttgtacaga 260

                                                                       
Query: 61  ttcctgtatcttgcatagaggaggtttggtttattaagatttatgggagagagccaatcc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctgtatcttgcatagaggaggtttggtttattaagatttatgggagagagccaatcc 320

                                                                       
Query: 121 ctcacactattaatgatatcttgctatgcttgcagaaaggagcctagcataactggcttc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcacactattaatgatatcttgctatgcttgcagaaaggagcctagcataactggcttc 380

                                                                       
Query: 181 ttccagcagctgatggaaacagttgcagagactcacagccaaacattacactcagctcag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttccagcagctgatggaaacagttgcagagactcacagccaaacattacactcagctcag 440

                                                                       
Query: 241 agtcttgtataataattgggggaaggaatcaggaaaccagggaggttaaggacaccaaaa 300
           ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agtcttgtagaagaattgggggaaggaatcaggaaaccagggaggttaaggacaccaaaa 500

                                                                       
Query: 301 gaagacatacagagtctactaaccttttcccatgggtgctcaaccagagaacatgcatgg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gaagacatacagagtctactaaccttttcccatgggtgctcaaccagagaacatgcatgg 560

                                                                       
Query: 361 actgcacatagcaccccccct--acatatttatagttgatgtgcaacttggtcttcatgt 418
           ||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||
Sbjct: 561 actgcacatagcaccccccccccacatatttatagttgatgtgcaacttggtcttcatgt 620

                                                                       
Query: 419 gagttgcataacaattgaagcatgctttttctgatgatgttgcctgccttggatcacctt 478
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gagttgcataacaattgaagcatgctttttctgatgatgttgcctgccttggatcacctt 680

                                                                       
Query: 479 cttgtagctgggttgccttgactggcctcagtgggatgctacatccaccctagtagtgac 538
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cttgtagctgggttgccttgactggcctcagtgggatgctacatccaccctagtagtgac 740

                                                                       
Query: 539 acgaatgacaggccaaaagcctggatacagtcccaaggcaaaaagttcacggaaacttag 598
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 acgaatgacaggccaaaagcctggatgcagtcccaaggcaaaaagttcacggaaacttag 800

                                
Query: 599 tctcctggaactgtggcatcc 619
           |||||||||||||||||||||
Sbjct: 801 tctcctggaactgtggcatcc 821


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1019
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1009
Effective search space:   614481
Effective search space used:   614481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)