Query= MSMg01no493_f13.b1 MSMg01no493_f13.b1 CHROMAT_FILE:
MSMg01no493_f13.b1 PHD_FILE: MSMg01no493_f13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:50 2005
(633 letters)
>mm_chr17_68715624_68716656
Length = 1033
Score = 847 bits (438), Expect = 0.0
Identities = 456/462 (98%), Gaps = 1/462 (0%)
Strand = Plus / Minus
Query: 173 ataataaaaatgttggaaatgcgtaacagtggaaaaatactaaaaggagtaag-aaaaaa 231
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 1033 ataataaaaatgttggaaatgcgtaacagtggaaaaatactaaaaggagtaagaaaaaaa 974
Query: 232 aacattaacacacagaggcaaataacaaaataagatcttgctgctcatcagaaacatggg 291
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 973 aacattaacacacagaggcaaataacaaaataagatcttgctgctcatcagaaacacggg 914
Query: 292 acaacatgtaatgatacctgtccatcaatggaaataaataactgccaaactagattgcta 351
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 913 acaacatgtaatgatacctgtccatcaatggaaataaataactgccaaactagattgcta 854
Query: 352 tacccagcaaaactatctttttaatttataaagctattcatatgtttgccactacatgtt 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 853 tacccagcaaaactatctttttaatttataaagctattcatatgtttgccactacatgtt 794
Query: 412 ccctgctggcacactacatatcctgtgcccatctgacagcatctcctcttgagtttgaga 471
|||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 793 ccctgctggcacactacatatcctatgcccatctgacagcatttcctcttgagtttgaga 734
Query: 472 ctccagacttccaccaccaactccacccaccccctgaccaggctttttaagaacctgtgt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 733 ctccagacttccaccaccaactccacccaccccctgaccaggctttttaagaacctgtgt 674
Query: 532 cctttacccatgcacaggttccttatttccatgtagaaatctgagactcctgctgcttga 591
|||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 673 cctttaaccatgcacaggttccttatttccatgtagaaatctgagactcctgctgcttaa 614
Query: 592 aaacaagggaaaagtggtgggaggctaaaggatgagctcaga 633
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 613 aaacaagggaaaagtggtgggaggctaaaggatgagctcaga 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_f13.g1 MSMg01no493_f13.g1 CHROMAT_FILE:
MSMg01no493_f13.g1 PHD_FILE: MSMg01no493_f13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:17:50 2005
(637 letters)
>mm_chr17_68548668_68549709
Length = 1042
Score = 750 bits (388), Expect = 0.0
Identities = 410/420 (97%), Gaps = 5/420 (1%)
Strand = Plus / Plus
Query: 1 tctaaaatgtttagagtaaggagttggttccactgccttgggtccctgcttcctgtcagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tctaaaatgtttagagtaaggagttggttccactgccttgggtccctgcttcctgtcagg 260
Query: 61 gctgccctctatggaactccattccaaacacacaccttttaagcaactatttcttttagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctgccctctatggaactccattccaaacacacaccttttaagcaactatttcttttagc 320
Query: 121 attttgagtccaactgggatttttacatggtttttttt-----gaatccagaaatagatt 175
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||
Sbjct: 321 attttgagtccaactgggatttttacatgttttttttttttttgaatccagaaatagatt 380
Query: 176 tcttcataagcaaacttgatctcaagtccccccagggcaaggatgaggttgttagaactt 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttcataagcaaacttgatctcaagtccccccagggcaaggatgaggttgttagaactt 440
Query: 236 tgcctcggattgtggctttctcactttggggcacaggtctctacggaagagaagctgtgt 295
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgcctcggattgtggctttctcactttggggcacaggtctctacggaagagaagctgtgt 500
Query: 296 tctatgggcatcactacatttttatgaagaaaaagaattcatctgtggtatttggcagga 355
|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tctatgggcatcactatatttttatgaagaaaaagaattcatctgtggtatttggcaggg 560
Query: 356 aagacaggtacaaccatgtgactttactcatggggacaaagctaagatatcattaaaccc 415
|||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aagataggtgcaaccatgtgactttactcatggggacaaagctaagatatcattaaaccc 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1042
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1032
Effective search space: 647064
Effective search space used: 647064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
