Query= MSMg01no493_l02.b1 MSMg01no493_l02.b1 CHROMAT_FILE:
MSMg01no493_l02.b1 PHD_FILE: MSMg01no493_l02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:20 2005
(642 letters)
>mm_chr17_50744696_50745737
Length = 1042
Score = 1152 bits (596), Expect = 0.0
Identities = 629/640 (98%), Gaps = 2/640 (0%)
Strand = Plus / Plus
Query: 4 ggaattcaagtgtatatttaatatacactttgtgggttcatacttaatcatttgtatcct 63
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcgagtgtatatttaatatacactttgtgggttcatacttaatcatttgtatcct 263
Query: 64 agtcatatatagagtccagaaataaaatagtcaaaacgtactagtgagcccaagaggcta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 agtcatatatagagtccagaaataaaatagtcaaaacgtactagtgagcccaagaggcta 323
Query: 124 gcaaaagtctttcagactttagtctatgtacccagcatgtggggagctacccgagtacag 183
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 324 gcaaaagtctttcagactttagtctatgttcccagcatgtggggagctacccgagtacag 383
Query: 184 attcctgccaccatctctagagatctgattctctaggctcagaaacctgcagtttaacca 243
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 attccttccaccatctctagagatctgattctctaggctcagaaacctgcagtttaacca 443
Query: 244 agtagtcaggtgagttttgaggcataaagtgctgagcctgtaggagacactgatgtaggg 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 agtagtcaggtgagttttgaggcataaagtgctgagcctgtaggagacactgatgtaggg 503
Query: 304 attagttagtgtctacacaggtacatgagtgctgtggttgcaaaggcccccacacaaaaa 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 504 attagttagtgtctacacaggtacatgagtgctgtggttgcaaaggcccccacataaaaa 563
Query: 364 tgggtactgcagtgagcttaatgttcttctcttgaatgccttggaattcttggtagtttg 423
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 564 tgggtactgcagtgagcttaatgttcttctcttgagtgccttggaattcttggtagtttg 623
Query: 424 taagccaaggagtcttgcattttctgaaaattatacagccagtataaataagtgtctgct 483
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 624 taagccaaggagtcttgcattttctgaaaattatacagccaggataaataagtgtctgct 683
Query: 484 ctctgtgaattaga-ttccttgacaaatacggattgtggttattaagcaatgatatcttg 542
||||||||||| || ||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 684 ctctgtgaatt-gaattccttgacaaatacggattgtggttattaagcaatgatttcttg 742
Query: 543 ttcgttggcatgagattgcactctaaggcctcttctaaatgaaaggtgaacagctgtcat 602
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 ctcgttggcatgagattgcactctaaggcctcttctaaatgaaaggtgaacagctgtcat 802
Query: 603 tcatcacaagatccgcataggaaatcacagtacacagctt 642
|||||||||||||| |||||||||||||||||||||||||
Sbjct: 803 tcatcacaagatccccataggaaatcacagtacacagctt 842
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no493_l02.g1 MSMg01no493_l02.g1 CHROMAT_FILE:
MSMg01no493_l02.g1 PHD_FILE: MSMg01no493_l02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:18:20 2005
(620 letters)
>mm_chr17_50929322_50930341
Length = 1020
Score = 1035 bits (535), Expect = 0.0
Identities = 544/547 (99%)
Strand = Plus / Minus
Query: 70 ttctgaaagatgtcttatctctagatcctactctagttttttcagtatacgaagtaccag 129
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 1020 ttctgaaagatgtcttatctctagatcctactctagttttttcagtatacgaagcaccag 961
Query: 130 gtcaaggcccacttaagctcctgcttctcattttcttcagatacagccgagaaactgtga 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 960 gtcaaggcccacttaagctcctgcttctcattttcttcagatacagccgagaaactgtga 901
Query: 190 agtctctgagttgcttctctcccttcctcatttatttttaggactcatggttagacggcc 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 900 agtctctgagttgcttctctcccttcctcatttatttttaggactcatggttagacggcc 841
Query: 250 cagaagtgacagtccaaaataccctatccacgaaatcctaccttactcagacctgcagca 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 cagaagtgacagtccaaaataccctatccacgaaatcctaccttactcagacctgcagca 781
Query: 310 tctcctgccatattggttgcacagtcatgggtcctgggagtcaaggaagtggacatcatt 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tctcctgccatattggttgcacagtcatgggtcctgggagtcaaggaagtggacatcatt 721
Query: 370 gtgagcgccataagaatggtgtgctttcctgtttaaggaaggatgtagccctcaggcaga 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 gtgagcgccataagaatggtgtgctttcctgtttaaggaaggatgtagccctcaggcaga 661
Query: 430 aagacagagtcttaatagaggaacaaacagaaaaatcagagtcattgccatggtgcctgt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 aagacagagtcttaatagaggaacaaacagaaaaatcagagtcattgccatggtgcctgt 601
Query: 490 aaaaagcccctcccccagctgtgcttgcctttgatccgagcactcgggagtcagaaacag 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aaaaagcccctcccccagctgtgcttgcctttgatccgagcactcgggagtcagaaacag 541
Query: 550 gcagccagcctgggctgcatggtgagttctaaaacagccaggactgtttccctgtctgga 609
||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 540 gcagccagcctggactgcatggtgagttctaaaacagccagggctgtttccctgtctgga 481
Query: 610 aaaagca 616
|||||||
Sbjct: 480 aaaagca 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space: 616100
Effective search space used: 616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
