Query= MSMg01no503_l06.b1 MSMg01no503_l06.b1 CHROMAT_FILE:
MSMg01no503_l06.b1 PHD_FILE: MSMg01no503_l06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:04 2005
(505 letters)
>mm_chr17_43663265_43664169
Length = 905
Score = 410 bits (212), Expect = e-118
Identities = 254/268 (94%)
Strand = Plus / Plus
Query: 238 gtttctgatttttcttttgcaaatttgatatgaatgtatactttttaagctccagtatga 297
||||||||||| ||||||||||||||| ||||| ||||||||||||||||||| |||||
Sbjct: 438 gtttctgatttctcttttgcaaatttggtatgagtgtatactttttaagctcctgtatgg 497
Query: 298 gaacatgtttaagagcacaccggctcttttaatcatgtgcctggaagggaatctttttgt 357
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 498 gaacatgtttaagagcacaccggctcttttaatcaggtgcctggaagggaatctttttgt 557
Query: 358 cctcgtcttgtcaaatgagatgagtgttatgcctctccagggttcagccgtcacagccat 417
|| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 558 ccccgtcttgtcaaatgagatgggtgtcatgcctctccagggttcagccgtcacagccac 617
Query: 418 gcaaaacaatgggcagtctccaggaaactcacttatccagcgcagctctgcatgctgttt 477
||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||
Sbjct: 618 gcaaaacaatgggcagtctccaggaaactcactaatccagtgcagctctgcatgctgttt 677
Query: 478 gtggtgtgtgtgcgtgtgtgcgtgtgtg 505
|||||||||||| ||||||| |||||||
Sbjct: 678 gtggtgtgtgtgtgtgtgtgtgtgtgtg 705
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 505
Length of database: 905
Length adjustment: 10
Effective length of query: 495
Effective length of database: 895
Effective search space: 443025
Effective search space used: 443025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no503_l06.g1 MSMg01no503_l06.g1 CHROMAT_FILE:
MSMg01no503_l06.g1 PHD_FILE: MSMg01no503_l06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:31:04 2005
(234 letters)
>mm_chr17_43872641_43873272
Length = 632
Score = 426 bits (220), Expect = e-124
Identities = 230/234 (98%), Gaps = 2/234 (0%)
Strand = Plus / Minus
Query: 1 ttagaactcagatgatcaagctggcatagcaagtttgagcctggaaaagaccaggcctat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ttagaactcagatgatcaagctggcatagcaagtttgagcctggaaaagaccaggcctat 373
Query: 61 ctttgtatcttgtcacatctaatctctccaaccacaataaactattccagaacatttttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 372 ctttgtatcttgtcacatctaatctctccaaccacaataaactattccagaaca--tttt 315
Query: 121 ttttatctttaactctgcagtgtttaagctaagtgatctaagttaggacacagactatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 314 ttttatctttaactctgcagtgtttaagctaagtgatctaagttaggacacagacaatta 255
Query: 181 tatggaggaagagattttgtctgtgaggagaggggagagagggggaaaggggag 234
||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 tatggaggaagaggttttgtctgtgaggagaggggagagagggggaaaggggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 234
Length of database: 632
Length adjustment: 9
Effective length of query: 225
Effective length of database: 623
Effective search space: 140175
Effective search space used: 140175
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
