NGGGGACCACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTCCGCC
CGNNNNNGAGGGGGNNNNNNNNNNGGAGGGGGGGGGGGGGGGGGGNGGGN
NGAAAAAAAAAAAATTAANNNNNGGNGGGNANNGGNGGGGCGGGGGGGGG
GGGAANAAAAGGGGGGGGGGGGGGGGGGGGGGGNNNNNNNNNNNAAAGAA
NNNNGTGCCTNNTTTTATTTTTCTCCCCNTACTTTGTGTGTTAGAAAGGA
GTTTTCCCANTGGAAGGTTTAAATTGGGTAAATTTTAAAACCCCATTGGG
GGAGTTCCCTTCCCCCCCCCACCCTTCCCCTTTGGGTGGGTGTTTCCCCC
CTTTCCCCACCCCCTTTCCTTTTCCCCCCCCCCATCCCTTTTCCACCAAA
ATTTAACCTGGGAGAAAATTTAAATTGGGGGGTTTTCCCCTTTTTCCCGT
TTAAGTAGATTAATTTAGTTTTTTATTAGAACCCCCCCCCCAAACCCTAA
GTTTTTAGGGAACCCTAGAGGTTGGGCCTTTTAGGGTTTGGGGGAATTGG
GCTCCCCCGGGGGGGGAGGTGGCCCTTAATTAAAGGGGGGGTTTTCCCCC
CCCCCTTGGGGGGGGGGGCCGGGGGGAAAAACCCCCCCGGTTTTAGGAGC
CGGGGGGGGCTCCCCTGGGGCCCCCTGGGGGGGGGGGAGGAACCCCCCCA
ATTTTTTTTTTTTTCCCCCCCCCCCCCGGGGGGGCGGGGCCCAGGGGGGG
GGGGCCCCCCCTCCCCCCCCCTCCCGGAGGGGGGGGGGGGGGGGTTTTTT
TGTGGGGGGGGGGGGGGAGAAAAAGACCTCCTTTTCTCCCCCCTTTCGGG
GGGGGGGGGTGTTTACCACCCCCCCAAAGGGGGGGGGGGGGGGG

CATTCAGCGATGATAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCTCAAATCTAGATTTTT
AAAAAAGTACTTTCTATATTGTGAATTCTTGTATTCTTTTGATCTTTTAC
ATATTATTTAATATATAAACTAATAAAAATTAGTGGTACTATTTCAGTTT
TAAGTGTGAAGTTCCTAACATCTTTAACGGTATTCAGTTGGTCAAAATTT
GGCTTTAATAATTGATGGGAAAGTGTCTTATTAGAACAGGGCTAGGATTT
CAGCTTGGGAGGTAGAGCACATGGTTAGTATGTAAGAGGCTCTCTAGGTC
AGTCTTTAGCAAAACAAAAAGAAAAAAAAAAAAACCAAAACTACAGGAAT
GTTACATGCTGGTGATGGAAACATTGAAAAGTGAAAATACATCTAAACAG
CCCGGAATCCTCTTCTATGTTTTTTTTTTTTTCTGTTTGATTTTGTTCAA
TTTTATACTTTTTTAGTATAATGAATTTGTTTTTAGACGATAATATTTGT
TAGGCATATCCTTCATGAAGATTATCATCCAGTTCCTGAAAGTAAATCCT
TTTTTCCTACAAGGAAGGGGGGGTTCCAACTTTGTCTACATTTTACTTCT
GAACTGGTTTGAAGGAAACCAGCACTGGCCTTGGAAATCTAATCAAATCA
CGGGTTTTTGAAAACACCCCCT

Query= MSMg01no504_i02.g1 MSMg01no504_i02.g1 CHROMAT_FILE:
MSMg01no504_i02.g1 PHD_FILE: MSMg01no504_i02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:08 2005
         (457 letters)



>mm_chr17_51265559_51266418
          Length = 860

 Score =  820 bits (424), Expect = 0.0
 Identities = 450/460 (97%), Gaps = 3/460 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcaaatctagatttttaaaaaagtactttctatattgtgaattcttgtattcttttga 60
           |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 760 tctcaaatctagattttttaaaaagtactttctatgttgtgaattcttgtattcttttga 701

                                                                       
Query: 61  tcttttacatattatttaatatataaactaataaaaattagtggtactatttcagtttta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 tcttttacatattatttaatatataaactaataaaaattagtggtactatttcagtttta 641

                                                                       
Query: 121 agtgtgaagttcctaacatctttaacggtattcagttggtcaaaatttggctttaataat 180
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 640 agtgtgaagttcctaacatctttaacagtattcagttggtcaaaatttggctttaataat 581

                                                                       
Query: 181 tgatgggaaagtgtcttattagaacagggctaggatttcagcttgggaggtagagcacat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 tgatgggaaagtgtcttattagaacagggctaggatttcagcttgggaggtagagcacat 521

                                                                       
Query: 241 ggttagtatgtaagaggctctctaggtcagtctttagcaaaacaaaaag---aaaaaaaa 297
           || ||||||||||||||||||||||||||||||||||||||||||||||   ||||||||
Sbjct: 520 ggctagtatgtaagaggctctctaggtcagtctttagcaaaacaaaaagaaaaaaaaaaa 461

                                                                       
Query: 298 aaaaaccaaaactacaggaatgttacatgctggtgatggaaacattgaaaagtgaaaata 357
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 aaaaaccaaaactacaggaatgttacatgctggtgatggaaacattgaaaagtgaaaata 401

                                                                       
Query: 358 catctaaacagcccggaatcctcttctatgtttttttttttttctgtttgattttgttca 417
           |||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 400 catctaaacagccccgaatcctcttctatgtgtttttttttttctgtttgattttgttca 341

                                                   
Query: 418 attttatacttttttagtataatgaatttgtttttagacg 457
           || |||||||||||||||||||||||||||||||||||||
Sbjct: 340 atcttatacttttttagtataatgaatttgtttttagacg 301


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 40
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 457
Length of database: 860
Length adjustment: 10
Effective length of query: 447
Effective length of database: 850
Effective search space:   379950
Effective search space used:   379950
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)