TAATTATTCCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXCGCGGAATTCTCAGTTTCGGTTTTACTCAATACTCTCATGCACTCAC
ATACTCTCAATCTACACTTATATGTGTATTATGTGCTACAATTTTACCTT
CAGAAAAAAGTTATTTCTTGATTTATCCCATTCTTGTGCACAGCCATTAT
GATTATAATATTTCCTTTAAATTTGAATTCAAGTCAAAATTATAAATCCC
TAATAAATTCAGAAACAAGATTATGTTGTTCACTGTCTGCACTACTGTTC
ATTAAAGGCATTGAAGCTTGGAACTCTTAAGTGAAAACAATTAAAAGGCA
TAGAAAGGAAGAGAAGAATTTAGAGGAACTCAATTGGTCAATATGATTTC
CTAGGAAGGAAAACATAAAGTCTACACCACAGGATTTTTAAACCATGTAA
ATATGTCTTTGTCTTAAGAACACACACATACATGTGCACTAATGGGATTC
TCCATACTTAAAAATTAAAACTTAAAAAGTTAGGATGTACATAAATTTGC
AAGTGAAAGTGATGATGGTTTACATTTTCATATTACCATAGAATACATTT
TTCTAAAAGCAACTCACCTCCATTTCTACTTTTGTCATTCCTATCCTATT
TCCATACTTTCACTTGCAAATGTATATGCTTACTGTTTCCTTTTAAAACT
TGCTGAATTGACTTAAAGACATTATA

TCTTTTTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATAGAAACAAATTACCTTG
TATACATTTTCTGTACACTGTGTGTACATCTGCACGTTTAATTTTTTTTA
AAGTTCCTAATTTGTTTCATATTGTTATCTGGCTCATGGACAATGCAGTC
TTTACAAGCAAACACTTGTATTTTACATTTGCTGCACAATTTACCTCTCT
TCTGTCTTCTAATCTTTCCATACACACACTAATTATCTCTTTCTAATAAA
TGCCTGTTTTAACTTTGACATTCATGGTTAAAACTTGAGTCATAATCACT
CCATAGATAACTATAATGTCTTGTTCTTGCTCTTACTCAATACACACAAA
TAACAACAAATGAAACAAATGACCTACCAAACAATCTAGGTTACACTCAT
TGACCATAACTTAGAGAGCAACAGCATTTGTATTCTTACTTGGTGGATCT
GTAAATAAGAAATTGCATATAAGACATCTCCTTCTTATGACAATTTAATC
AAAATATTGTTTTACTATCTAACATGGCCAGATGTGGAAATTCATTGAAA
TCGAATTATCTAGGCATCAGTATGGTGCATAGATTTATATTGTTCCCTGT
TTGACCAAATTTATTTGTGAAGTTTGCTGGGCAGTTTCATAACTTCCCTG
TATATTTTAAAGATGGAGGCTCCCATGTGTCTGTGGG

Query= MSMg01no504_p07.b1 MSMg01no504_p07.b1 CHROMAT_FILE:
MSMg01no504_p07.b1 PHD_FILE: MSMg01no504_p07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:32:44 2005
         (645 letters)



>mm_chr17_39317741_39318786
          Length = 1046

 Score = 1193 bits (617), Expect = 0.0
 Identities = 639/647 (98%), Gaps = 3/647 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttactcaatactctcatgcactcacatactctcaatctacacttatatgtgtattatg 60
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 ttttactcaatactctcatgcactcacatactctcaatctactcttatatgtgtattatg 260

                                                                       
Query: 61  tgctacaattttaccttcagaaaaaagttatttcttgatttatcccattcttgtgcacag 120
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 261 tgctacaattttaccttcagaaaaaagttatttcttaatttatcccattcttgtgcacag 320

                                                                       
Query: 121 ccattatgattataatatttcctttaaatttgaattcaagtcaaaattataaatccctaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccattatgattataatatttcctttaaatttgaattcaagtcaaaattataaatccctaa 380

                                                                       
Query: 181 taaattcagaaacaagattatgttgttcactgtctgcactactgttcattaaaggcattg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaattcagaaacaagattatgttgttcactgtctgcactactgttcattaaaggcattg 440

                                                                       
Query: 241 aagcttggaactcttaagtgaaaacaattaaaaggcatagaaaggaagagaagaatttag 300
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaggttggaactcttaagtgaaaacaattaaaaggcatagaaaggaagagaagaatttag 500

                                                                       
Query: 301 aggaactcaattggtcaatatgatttcctaggaaggaaaacataaagtctacaccacagg 360
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggaactcaattggtcaatatgacttcctaggaaggaaaacataaagtctacaccacagg 560

                                                                       
Query: 361 atttttaaaccatgtaaatatgtctttgtcttaagaacacacacatacatgtgcactaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atttttaaaccatgtaaatatgtctttgtcttaagaacacacacatacatgtgcactaat 620

                                                                       
Query: 421 gggattctccatacttaaaaattaaaacttaaaaagttaggatgtacataaatttgcaag 480
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gggattctgcatacttaaaaattaaaacttaaaaagttaggatgtacataaatttgcaag 680

                                                                       
Query: 481 tgaaagtgatgatggtttacattttcatattaccatagaatacatttttctaaaagcaac 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgaaagtgatgatggtttacattttcatattaccatagaatacatttttctaaaagcaac 740

                                                                       
Query: 541 tcacctccatttctacttttgtcattcctatcctatttccatactttcacttgcaaatgt 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 tcacctccatttctacttttgtcattcctatcctatttccatactttcacttgcaaatgt 800

                                                          
Query: 601 atatgcttact--gtttccttttaaaacttgctgaattgacttaaag 645
           |||||||||||  |||||||||||||||| |||||||||||||||||
Sbjct: 801 atatgcttactctgtttccttttaaaact-gctgaattgacttaaag 846


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 645
Length of database: 1046
Length adjustment: 10
Effective length of query: 635
Effective length of database: 1036
Effective search space:   657860
Effective search space used:   657860
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)