Query= MSMg01no505_i07.b1 MSMg01no505_i07.b1 CHROMAT_FILE:
MSMg01no505_i07.b1 PHD_FILE: MSMg01no505_i07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:27 2005
(677 letters)
>mm_chr17_76029107_76030182
Length = 1076
Score = 1239 bits (641), Expect = 0.0
Identities = 668/677 (98%), Gaps = 1/677 (0%)
Strand = Plus / Plus
Query: 1 aatagctcttctttccaactcttggtggtgctggtgcacagggaaacagcgtattttctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatagctcttctttccaactcttggtggtgctggtgcacagggaaacagcgtattttctt 260
Query: 61 ccttgcaaggttaagagggttactatttagaaaacagcctgacaaaaataagtgtttgca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttgcaaggttaagagggttactatttagaaaacagcctgacaaaaataagtgtttgca 320
Query: 121 agtatgcagtaaattacacagtgatgccgtggttctgatacgctgcatcactgatatgct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtatgcagtaaattacacagtgatgccgtggttctgatacgctgcatcactgatatgct 380
Query: 181 gtatgtagacagcgtcacatcgtgaggcttactgctatagcttgttttctaactgatgca 240
|||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gtatgtagacagcgtcacattgtgaggcttactgctatagcttgttttctaa-tgatgca 439
Query: 241 aaatataaagtacccagttttcatgtcaccaagtctgccacactgggattttctccttga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 aaatataaagtacccagttttcatgtcaccaagtctgccacactgggattttctccttga 499
Query: 301 tttttttcccccaatggaaccctgcatatacttactatttaagttgtgtgcattatgcat 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 500 tttttttcccccaatggaaccctgcatatacttactatttaagttgtgtacattatgcat 559
Query: 361 aattatagacactctgattcagtggtactattggagtggtggaaaatgaagcgatggtgg 420
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aattatagagactatgattcagtggtactattggagtggtggaaaatgaagcgatggtgg 619
Query: 421 taaaataacagtgtggctcctggagattcatgagaaagcagtctaagaggacggcagagg 480
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 620 taaaataacagtgtggctcctgaagattcctgagaaagcagtctaagaggacggcagagg 679
Query: 481 aaaggctgcgtgagttcagctttccccttttcatcttcacacttattttgtcattgctca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaaggctgcgtgagttcagctttccccttttcatcttcacacttattttgtcattgctca 739
Query: 541 tgcatgtgagagactgaaaattgcacccgacttatcctttcccttcttgctagagtaaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgcatgtgagagactgaaaattgcacccgacttatcctttcccttcttgctagagtaaaa 799
Query: 601 taatgctagcaaaataaaatatctggcattacagaaggtggcaggtcttgatgtctccca 660
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 taatgctagcaaaacaaagtatctggcattacagaaggtggcaggtcttgatgtctccca 859
Query: 661 aaacaatcctaaaccag 677
|||||||||||||||||
Sbjct: 860 aaacaatcctaaaccag 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 677
Length of database: 1076
Length adjustment: 10
Effective length of query: 667
Effective length of database: 1066
Effective search space: 711022
Effective search space used: 711022
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no505_i07.g1 MSMg01no505_i07.g1 CHROMAT_FILE:
MSMg01no505_i07.g1 PHD_FILE: MSMg01no505_i07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:33:27 2005
(375 letters)
>mm_chr17_76181308_76182087
Length = 780
Score = 350 bits (181), Expect = e-101
Identities = 222/241 (92%), Gaps = 10/241 (4%)
Strand = Plus / Minus
Query: 1 aggagaaagccaaggacagctagtgcaatgatgtcgtgggtcgaagc-----aaaaaaaa 55
|||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||
Sbjct: 405 aggagaaagccaaggacagctagtgcaatgatgtagtgggtagaagcaaaaaaaaaaaaa 346
Query: 56 aaaaaaaatcaagaattaggaatgttgatctctaaagacagcctttgcaaggcagcctta 115
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 345 aaaaaaaatcaagaattaggaatgttgatctttaaagacagcctttgcaaggcagcctta 286
Query: 116 atacttctttctccataaattttagaagccaggttactcagccatagccatggtcatttt 175
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 285 atacttctttctccataaattttagaatccaggttactcagccatagccatggtcatttt 226
Query: 176 gcaatagagtctttaaaattcaaggacagatgcataaatccagttaaaaatatttcttcc 235
||| |||||||||| ||||||||| |||||||||||| ||||||||||| |||||
Sbjct: 225 gcagtagagtctttggaattcaagg-----tgcataaatccaattaaaaatattccttcc 171
Query: 236 g 236
|
Sbjct: 170 g 170
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 780
Length adjustment: 9
Effective length of query: 366
Effective length of database: 771
Effective search space: 282186
Effective search space used: 282186
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
