Query= MSMg01no507_i12.b1 MSMg01no507_i12.b1 CHROMAT_FILE:
MSMg01no507_i12.b1 PHD_FILE: MSMg01no507_i12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:06 2005
(614 letters)
>mm_chr17_87163612_87164625
Length = 1014
Score = 1104 bits (571), Expect = 0.0
Identities = 601/611 (98%)
Strand = Plus / Plus
Query: 4 ggaattcaggaatattgcgaccttagttcaaagggatggaaaccacaggcagaaacactg 63
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcaggaatatggggaccttagttcaaagggatggaaaccacaggcagaaacactg 263
Query: 64 cctcagatcagcttacccatccttatttgataatcaccacgcaggtcagaagaggtttgt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cctcagatcagcttacccatccttatttgataatcaccacgcaggtcagaagaggtttgt 323
Query: 124 ggtactgctggcctcgagtatacgtgctcacaggttatttgctgatttggggactgggct 183
||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||
Sbjct: 324 ggtactgctggcctcgagtatacatgcttacaggttatttgctgatttggggactgtgct 383
Query: 184 acacagagagatcacagcaaggcatttgatgactctggtctcttcaaatgactcgtttaa 243
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gcacagagagatcacaccaaggcatttgatgactctggtctcttcaaatgactcgtttaa 443
Query: 244 accagtatgtggcagtgtgtggcaccaaggcacctggctgcatctttaggatgttgccat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 accagtatgtggcagtgtgtggcaccaaggcacctggctgcatctttaggatgttgccat 503
Query: 304 cttggtgtggagtaaaaactaggccagatacagcacagagccaggagcagaaaatggata 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttggtgtggagtaaaaactaggccagatacagcacagagccaggagcagaaaatggata 563
Query: 364 ggaatcgagagctctgggttgtataaagttaaaaaggactgggctggagaagaccagagc 423
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ggaatcgagagctctgagttgtataaagttaaaaaggactgggctggagaagaccagagc 623
Query: 424 tttgagagaagagcattaaataagacttcagtcttgaagattagaatttgggtttgcaca 483
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 624 tttgagagaagagcattaaataagacttcggtcttgaagattagaatttgggtttgcaca 683
Query: 484 ggcagcaactgcaggctacgctggggatgggcgaggcagtgcagaccgagagacggaaag 543
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 684 ggcagcaactgcaggctacgctggggatgggcgaggcagtgcagaccgcgagacggaaag 743
Query: 544 aagcagagtgcgcaggacagggcttggggggtgctcctttctttcaactcggaatcagta 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 aagcagagtgcgcaggacagggcttggggggtgctcctttctttcaactcggaatcagta 803
Query: 604 gatcttatatt 614
|||||||||||
Sbjct: 804 gatcttatatt 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no507_i12.g1 MSMg01no507_i12.g1 CHROMAT_FILE:
MSMg01no507_i12.g1 PHD_FILE: MSMg01no507_i12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:36:07 2005
(539 letters)
>mm_chr17_87307362_87308302
Length = 941
Score = 845 bits (437), Expect = 0.0
Identities = 495/515 (96%), Gaps = 2/515 (0%)
Strand = Plus / Minus
Query: 1 cactgcttgaaaggggcgagcaaaggctgatctgtccagtgactttggttggaaccagcc 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 515 cactgcttgaaaggggcgggcaaaggctgatctgtccagtgactttggttggaaccagcc 456
Query: 61 tggctactcaagagcctgtctcaaacagatacacaaaggctcacatttccaagaggggaa 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 455 tggctactcaagagcctgtctcaaacagatacacaaaggctcacatttccaagaggggca 396
Query: 121 tgagtgcaagggttgacctgtgtcgacaggagtttaaccttggctttgctttcagatagc 180
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 tgagtgcaggggttgacctgtgtcgacaggagtttaaccttggctttgctttcagatagc 336
Query: 181 aaacctgaggtaccttttcccagggggatcgtctcaggaggccaatctgaggtctgcagc 240
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 aaccctgaggtaccttttcccagggggatcgtctcaggaggccaatctgaggtctgcagc 276
Query: 241 ctgaatctcaagtgtctctgatcgtacgagttttagaagttccctccactg--ctacata 298
||||| |||||||||||||||||||||||||||||| |||||||||||||| |||||||
Sbjct: 275 ctgaagctcaagtgtctctgatcgtacgagttttaggagttccctccactgtgctacata 216
Query: 299 atgctggatacttgctgtggtggatttggtttaacgcttgtattatgttaaatgggttcc 358
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 215 atgctggatacttgctgtggtggatttggtttaatgcttgtattatgttaaatgggttcc 156
Query: 359 caaaattgcaggaggatctgcatctaaaaccctgaggattcctgccctcgtttggttttc 418
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 155 caaaattgcaggaggacctgcatctaaaaccctgaggattcctgccctcgtttggttttc 96
Query: 419 attggtaaatacagttgctggcagccaatggctgggcagggagacagagatgggacttta 478
|||||| |||| | | || || ||||||||||||||||||||||||| |||||||||||
Sbjct: 95 attggtgaataaaatggccagcggccaatggctgggcagggagacagacatgggacttta 36
Query: 479 ggatttgagggcaaagggacagagagaggaatgag 513
|||||||||||||||||||||||||| ||| ||||
Sbjct: 35 ggatttgagggcaaagggacagagaggggactgag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 941
Length adjustment: 10
Effective length of query: 529
Effective length of database: 931
Effective search space: 492499
Effective search space used: 492499
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
