Query= MSMg01no508_f03.b1 MSMg01no508_f03.b1 CHROMAT_FILE:
MSMg01no508_f03.b1 PHD_FILE: MSMg01no508_f03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:11 2005
(673 letters)
>mm_chr17_24781220_24782292
Length = 1073
Score = 1295 bits (670), Expect = 0.0
Identities = 670/670 (100%)
Strand = Plus / Plus
Query: 4 ggaattcttcctcccagccctagccctgagcacacttcctgccttcttcagacaggccct 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcttcctcccagccctagccctgagcacacttcctgccttcttcagacaggccct 263
Query: 64 ctggctcccacgggctctgagacacatagccatagagctgggcaaaccccagtccccccg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 ctggctcccacgggctctgagacacatagccatagagctgggcaaaccccagtccccccg 323
Query: 124 ccactgaacctacagccagacaaggcagataagggggtgccctgggagccaggctctgcc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ccactgaacctacagccagacaaggcagataagggggtgccctgggagccaggctctgcc 383
Query: 184 ccccaccagataatgactcaccagccccagcagagaaaggcccccattgtttcttggggt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ccccaccagataatgactcaccagccccagcagagaaaggcccccattgtttcttggggt 443
Query: 244 ccatcttgtaggcataaacatccccgagttccctgcccttccccagagattgagctaaag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccatcttgtaggcataaacatccccgagttccctgcccttccccagagattgagctaaag 503
Query: 304 ctggggtcctgactgcccagctctgcctcatcccatctgacctgagtaagccccagttga 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctggggtcctgactgcccagctctgcctcatcccatctgacctgagtaagccccagttga 563
Query: 364 gagttcacaggaggggctcctggggctgaggcaggcagcatgctagtcctggagcgagcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gagttcacaggaggggctcctggggctgaggcaggcagcatgctagtcctggagcgagcc 623
Query: 424 atgagaaggggctaggagcgctggcagcaggtggtcagagttcttggaccagctgagact 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgagaaggggctaggagcgctggcagcaggtggtcagagttcttggaccagctgagact 683
Query: 484 gtcaccccacttatctacctcccactgtggcccaggttccctggggatgggtggggacat 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 gtcaccccacttatctacctcccactgtggcccaggttccctggggatgggtggggacat 743
Query: 544 agggactgactcattttgggtagcagggtggttactgaaccccctcccctgtccggcgtc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 agggactgactcattttgggtagcagggtggttactgaaccccctcccctgtccggcgtc 803
Query: 604 ccccccacccagcttggtttccgtcccaagaaaggaaggaaggaagctgctggaggccct 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ccccccacccagcttggtttccgtcccaagaaaggaaggaaggaagctgctggaggccct 863
Query: 664 gccctgctcc 673
||||||||||
Sbjct: 864 gccctgctcc 873
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no508_f03.g1 MSMg01no508_f03.g1 CHROMAT_FILE:
MSMg01no508_f03.g1 PHD_FILE: MSMg01no508_f03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:37:12 2005
(646 letters)
>mm_chr17_24953048_24954094
Length = 1047
Score = 704 bits (364), Expect = 0.0
Identities = 376/380 (98%), Gaps = 1/380 (0%)
Strand = Plus / Minus
Query: 268 agagagagagagagagagagagagattttagatcacttagtgactaaggccagtaaatct 327
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 agagagagagagagagagagagagattttagatcacttagtgactaaggccagtaaatct 813
Query: 328 agtaggaaattcatactctcatactcttagacactattgtatctgatgatatgaaactac 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 agtaggaaattcatactctcatactcttagacactattgtatctgatgatatgaaactac 753
Query: 388 aaattaatgaattgataaatttgattaactatttgttaaagcctttaaaatatagttgga 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 aaattaatgaattgataaatttgattaactatttgttaaagcctttaaaatatagttgga 693
Query: 448 gactatgatattatgtcactgaaaacactgtgtcttcatattacactcttgaatggagtg 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 gactatgatattatgtcactgaaaacactgtgtcttcatattacactcttgaatggagtg 633
Query: 508 tgatcatacacacacatgtaggaggcctggcctttgcccttcagatattaaacacactag 567
||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 tgatcatacacacgcatataggaggcctggcctttgcccttcagatattaaacacactag 573
Query: 568 aattttagtcagttaaatgtattattttt-gcagtaataagccacacttaatgaaaaatt 626
||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 572 aattttagtcagttaaatgtatttttttttgcagtaataagccacacttaatgaaaaatt 513
Query: 627 aagaaagagttaaatagaac 646
||||||||||||||||||||
Sbjct: 512 aagaaagagttaaatagaac 493
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 66
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1047
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1037
Effective search space: 659532
Effective search space used: 659532
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
