Query= MSMg01no509_e14.b1 MSMg01no509_e14.b1 CHROMAT_FILE:
MSMg01no509_e14.b1 PHD_FILE: MSMg01no509_e14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:28 2005
(650 letters)
>mm_chr17_4839926_4840975
Length = 1050
Score = 1164 bits (602), Expect = 0.0
Identities = 638/650 (98%)
Strand = Plus / Minus
Query: 1 aatggttttagccacaagacgttgtggccttgtctacacacacacttcgaatccatccta 60
|||| ||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 707 aatgattttagccacaagacgttgtggccttgtctacacacaaacttcgaatccatccta 648
Query: 61 agtccaagagcaccgaagtcttgaattagcagctcagcggtgcctgctgacaaggatctc 120
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 647 agtccaagagcaccgaaggcttgaattagcagctcagcggtgcctgccgacaaggatctc 588
Query: 121 tctcctgtcctctcttctgtggagtcattcacttggcagctgttggttggctgctgtagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 tctcctgtcctctcttctgtggagtcattcacttggcagctgttggttggctgctgtagc 528
Query: 181 ttcaggtatcccaagccctgcatccccagaagctgccaaatataatctctgttacatctt 240
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 ttcaggtatcccaagacctgcatccccagaagctgccaaatataatctctgttacatctt 468
Query: 241 gtaatgttttttgggtcatgtcctcctgactctccttggttcagggaagtggggaaactg 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 gtaatgttggctgggtcatgtcctcctgactctccttggttcagggaagtggggaaactg 408
Query: 301 aaactgtggcgaaggggaacaaacagtcaaaactgccttagaccagtcaccgtctattgg 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 aaactgtggtgaaggggaacaaacagtcaaaactgccttagaccagtcaccgtctattgg 348
Query: 361 caggacacaatgctgctctagaacaactcggctctgttcatgaagaaatgttggagtgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 347 caggacacaatgctgctctagaacaactcggctctgttcatgaagaaatgttggagtgac 288
Query: 421 ttcagataggcaatgcccgggcagcatgaactctcagataaaaatcaaaggatttatgtc 480
|||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||
Sbjct: 287 ttcagataggcaatgcccggacagcatgaactctcagataaaaatcaaagaatttatgtc 228
Query: 481 tgggagctataagttatgtatgaatccaaaatttattttaaaataaatatcttactacct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 227 tgggagctataagttatgtatgaatccaaaatttattttaaaataaatatcttactacct 168
Query: 541 taaatatgatacagtgacaacttaaaaacacaaatttcgtagataaccacactaataata 600
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 167 taaatatgatacagtgacaacttaaaaacacaaatttcgtagataactacactaataata 108
Query: 601 gatggttgtgggtaaaaagctaccagaagtcttggaaatggaagttttag 650
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 gatggttgtgggtaaaaagctaccagaagtcttggaaatggaagttttag 58
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_e14.g1 MSMg01no509_e14.g1 CHROMAT_FILE:
MSMg01no509_e14.g1 PHD_FILE: MSMg01no509_e14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:28 2005
(588 letters)
>mm_chr17_4686687_4687674
Length = 988
Score = 1129 bits (584), Expect = 0.0
Identities = 587/588 (99%)
Strand = Plus / Plus
Query: 1 aactacatgaatttcaaggatttggacatgcattgacaaaccatctccctaaaagaatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactacatgaatttcaaggatttggacatgcattgacaaaccatctccctaaaagaatgt 260
Query: 61 tggcatgagctcattctcctgctgctgtgccaatgagactgctcttaaccttaacagaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggcatgagctcattctcctgctgctgtgccaatgagactgctcttaaccttaacagaac 320
Query: 121 tagggctgtgagtgagccccaaactgcctgtagatatttatctgtggcacttggggtata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagggctgtgagtgagccccaaactgcctgtagatatttatctgtggcacttggggtata 380
Query: 181 tctccaagtctgggtcccaactgtgataatatttaaattgacgtatttttccatgattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctccaagtctgggtcccaactgtgataatatttaaattgacgtatttttccatgattaa 440
Query: 241 ctgtttgtaggaaataatagcatacggcttgaatctgaactgtctcccacgggtccctgt 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctgtttggaggaaataatagcatacggcttgaatctgaactgtctcccacgggtccctgt 500
Query: 301 cttaaagtctagattccctgctggtgatgctcttttgggaggtcctagaaactccagaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cttaaagtctagattccctgctggtgatgctcttttgggaggtcctagaaactccagaag 560
Query: 361 aaggaactgatacccggtccatgaccccttcctacctctgacagcctgcccactcctgac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aaggaactgatacccggtccatgaccccttcctacctctgacagcctgcccactcctgac 620
Query: 421 ttccggtctaccaggaagtgaatcgctctcctctcctaccgattcctactgccatgatgt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttccggtctaccaggaagtgaatcgctctcctctcctaccgattcctactgccatgatgt 680
Query: 481 ttttgcttaagcacccgaggccaagcaaccatggacaaaatcgactgaaagcaagtgtca 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttgcttaagcacccgaggccaagcaaccatggacaaaatcgactgaaagcaagtgtca 740
Query: 541 agacagatcttctcgtgccttggcctgactctataaagtatttaatta 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agacagatcttctcgtgccttggcctgactctataaagtatttaatta 788
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 988
Length adjustment: 10
Effective length of query: 578
Effective length of database: 978
Effective search space: 565284
Effective search space used: 565284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
