Query= MSMg01no509_h06.b1 MSMg01no509_h06.b1 CHROMAT_FILE:
MSMg01no509_h06.b1 PHD_FILE: MSMg01no509_h06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:41 2005
(651 letters)
>mm_chr17_92848437_92849488
Length = 1052
Score = 1083 bits (560), Expect = 0.0
Identities = 629/652 (96%), Gaps = 6/652 (0%)
Strand = Plus / Plus
Query: 4 aatatccaagacttaaacaatattccaagtcctcagtcatcaaaacatctctgagggtcc 63
||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 203 aatatccaagacttaaacaatattcaaagtccttagtcatcaaaacatctctgagggtcc 262
Query: 64 atcgcacattcataagcgtagctgaaatcgaaaactcaagagatgggacatgt-gatgca 122
|||||||||||||||| ||||||||||||||||||||||||||||||||| | || |||
Sbjct: 263 atcgcacattcataagaatagctgaaatcgaaaactcaagagatgggacatatgga-gca 321
Query: 123 aggagaacactccttcattgctgttgggaaacaatcacttggcaaatgaatttggcagtt 182
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 aggagcacactccttcattgctgttgggaaacaatcacttggcaaatgaatttggcagtt 381
Query: 183 ttttcagaaaactgagaatagttctacctcaagactcacctataccactcctgggcacat 242
||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ttttcagaaaagtgggaatagttctacctcaagactcacctataccactcctgggcacat 441
Query: 243 a-ccaaaagaat-ctttataatcccacaaagacacttgtccaacaatattcatagaagct 300
| ||||||| || || | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 acccaaaag-atgctccacaatcccacaaagacacttgtccaacaatattcatagaagct 500
Query: 301 ttattcattaataaaataagagtctaggaggtacaactctgaacatggatcagatttcta 360
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 501 ttattcattaataaaataagagtctaggaattacaactctgaacatggatcagatttcta 560
Query: 361 aatatttctccttgtggtc-tattgagtgtgtctctggagcaggccacagaaaatattct 419
||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||| |
Sbjct: 561 aatatttctccttgtggtcgtattgagagtgtctctggagcaggccacagaaaatatttt 620
Query: 420 ctgtaaaaggaaaaagacttaaaagtacttaggttcaaagatgtaattactcttttataa 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgtaaaaggaaaaagacttaaaagtacttaggttcaaagatgtaattactcttttataa 680
Query: 480 ttacttatctagttaatgtagctttaaggcacataaaactgatgggatagtcaaatcttt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttacttatctagttaatgtagctttaaggcacataaaactgatgggatagtcaaatcttt 740
Query: 540 gctctaatggatctatatttatacaaccaaggaatggtttgacgcaaaacacagacatat 599
||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 741 gctctaatgtatctatatttatacaaccaaagaatggtttgacgcaaaacacagacatat 800
Query: 600 tttaccagcttatactgcctttagaaatttaacttttttaaatatggaggaa 651
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tttaccagcttatactgcctttagaaatttaacttttttaaatatggaggaa 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1052
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1042
Effective search space: 667922
Effective search space used: 667922
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no509_h06.g1 MSMg01no509_h06.g1 CHROMAT_FILE:
MSMg01no509_h06.g1 PHD_FILE: MSMg01no509_h06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:38:41 2005
(474 letters)
>mm_chr17_93049791_93050664
Length = 874
Score = 507 bits (262), Expect = e-148
Identities = 289/298 (96%), Gaps = 2/298 (0%)
Strand = Plus / Minus
Query: 178 acagtcatctttagaatatatcccaggcaccctaactgtctttctaggacaaatccttta 237
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 521 acagtcatctttagaatatatcccaagcaccctaactgtctttctaggacaaatccttta 462
Query: 238 aagcttctat-aagccttttctcaaaaccagacaacattagaattagaaagtagaatcaa 296
|||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 461 aagcttct-tgaagccttttctcaaaaccagacaacattagaattagaaagtagaagcaa 403
Query: 297 agtctcacagatttacttctgtgtatttcttttttattagatatcttctttatttacatt 356
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 402 agtctcacagatttacttctgtgtatttcttttttattagatattttctttatttacatt 343
Query: 357 ttaaatattatcccctttcctagtttcccctccaaaaatcccctatcctttctcccctac 416
||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||
Sbjct: 342 ttaaatattatcccctttcctagtttcccctccaaaaatcccctaacctctctcccctac 283
Query: 417 ccttgctttccaacccacccactcccattcctggccctggtattctcctatactgggg 474
|||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 282 ccttgctttccaacccacccactcccattcctggccctggcattcccctatactgggg 225
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
