Query= MSMg01no513_d03.b1 MSMg01no513_d03.b1 CHROMAT_FILE:
MSMg01no513_d03.b1 PHD_FILE: MSMg01no513_d03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:36 2005
(728 letters)
>mm_chr17_26424180_26425307
Length = 1128
Score = 1141 bits (590), Expect = 0.0
Identities = 593/594 (99%)
Strand = Plus / Minus
Query: 4 ggaattctttgcttctgttataaacctgtgggtctctcattacagaggctgaccttaaac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 594 ggaattctttgcttctgttataaacctgtgggtctctcattacagaggctgaccttaaac 535
Query: 64 tcctagcctcaagcaatcctcctgccttactctgccaggacctcaagctccccatatgtg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 tcctagcctcaagcaatcctcctgccttactctgccaggacctcaagctccccatatgtg 475
Query: 124 tcaccaaaaccagctcagagccatttccttattgatccatggtagctcttggcagctaat 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 tcaccaaaaccagctcagagccatttccttattgatccatggtagctcttggcagctaat 415
Query: 184 gtgcaagtctgaaggaggagtctggcgccctgctcctgcagttccctggacccagaaggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 gtgcaagtctgaaggaggagtctggcgccctgctcctgcagttccctggacccagaaggc 355
Query: 244 tgagctaggagattccaggccagcctggaaactagagcaagacctgctcacactagagga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 354 tgagctaggagattccaggccagcctggaaactagagcaagacctgctcacactagagga 295
Query: 304 ggacaaggagaaagagggaaaagacaagaaagcaggagccagggaggaaagagtggacaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 ggacaaggagaaagagggaaaagacaagaaagcaggagccagggaggaaagagtggacaa 235
Query: 364 agaggaagagaagggagaaaggacagggagagagatcctctgtgagtttctagcgtctta 423
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 234 agaggaagagaagggagaaagcacagggagagagatcctctgtgagtttctagcgtctta 175
Query: 424 ttcttctttttctcagaaccagggtgaagcctaggtctcaggcttgtaagtagggtgtag 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 174 ttcttctttttctcagaaccagggtgaagcctaggtctcaggcttgtaagtagggtgtag 115
Query: 484 gttatgaaggagagtgtaaaaatgggtattgtttagtttggtctgagcgacttctttttc 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 114 gttatgaaggagagtgtaaaaatgggtattgtttagtttggtctgagcgacttctttttc 55
Query: 544 tgcccaagacagggagatcctaacttcttccccaactccacttgatggagacat 597
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 54 tgcccaagacagggagatcctaacttcttccccaactccacttgatggagacat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 728
Length of database: 1128
Length adjustment: 10
Effective length of query: 718
Effective length of database: 1118
Effective search space: 802724
Effective search space used: 802724
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no513_d03.g1 MSMg01no513_d03.g1 CHROMAT_FILE:
MSMg01no513_d03.g1 PHD_FILE: MSMg01no513_d03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:43:36 2005
(595 letters)
>mm_chr17_26278067_26279062
Length = 996
Score = 1139 bits (589), Expect = 0.0
Identities = 594/596 (99%), Gaps = 1/596 (0%)
Strand = Plus / Plus
Query: 1 tccctcatttttccaagtgctgagatgagattatagatttgtgccaatatactggcttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccctcatttttccaagtgctgagatgagattatagatttgtgccaatatactggcttta 260
Query: 61 tttatttattgagacagtctctcattttatagcccaggctagccttgactcaggatgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttatttattgagacagtctctcattttatagcccaggctagccttgactcaggatgact 320
Query: 121 ctcttcttgcctcagcctctgagctctgagatgacaggtaggaaccacgatgcctgtctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctcttcttgcctcagcctctgagctctgagatgacaggtaggaaccacgatgcctgtctt 380
Query: 181 ttgtttttaggatttattttgttccagttatctgactgacatatgcctctctctagctca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtttttaggatttattttgttccagttatctgactgacatatgcctctctctagctca 440
Query: 241 cttttagctgggaacatttggggctgtgttgctatctcctccttggatatgttgagaggc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttttagctgggaacatttggggctgtgttgctatctcctccttggatatgttgagaggc 500
Query: 301 actgctggagagcctgtgggatgtagcagaaaggaccaaagatcatagcagaggctccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgctggagagcctgtgggatgtagcagaaaggaccaaagatcatagcagaggctccta 560
Query: 361 tccaaatctgaacagatttggtcccttttgcacaccctgcacagcaacaaaaaatatagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tccaaatctgaacagatttggtcccttttgcacaccctgcacagcaacaaaaaatatagt 620
Query: 421 ttttaatttcttaagagtataggtggtatggttttcacttggtcgagctaagccatattc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttttaatttcttaagagtataggtggtatggttttcacttggtcgagctaagccatattc 680
Query: 481 tctgtatgcttctttatctaanaagcatacttgtatttgtaactgatttttttttt-ctg 539
||||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||
Sbjct: 681 tctgtatgcttctttatctaaaaagcatacttgtatttgtaactgatttttttttttctg 740
Query: 540 taccttttctgtctttccaaagtcactatatgctatgagaagggaatctccttgta 595
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 taccttttctgtctttccaaagtcactatatgctatgagaagggaatctccttgta 796
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 595
Length of database: 996
Length adjustment: 10
Effective length of query: 585
Effective length of database: 986
Effective search space: 576810
Effective search space used: 576810
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
