XXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGAATTCTTGA
TTCTCCTGGAAATAGATCCAGTTTCTGTCTCCCATTTTCTCCTCCTCCCA
TTTTCCTTATTTTTTTATTTTTGTATCTGCTACCATATAGTAAGCAAATA
CATATACAAACAACAGATCAACTTAGCATGGATTGTCAACTTCAAAATTT
GTGAACCAAAATAAATCTTTTTTTCTCTTTTTAGCAATTTTAAAATTTAA
ATATATGTTGATCATATTTTCACCCTTCCCTGAATCCTTACTTATCCTTT
TCCCATTCTTTCTCACCCAAATTGAAGTTGTTTTTCAAAAGCCAGACAGT
ACTCACAACCACATCACCAAAAGAAAACAAATATACAAACAAACCAAAAA
ATACCCAATACACACACACACACACACACACACACACACACACACACACA
CACACACACACACATAATCACCTTGGAAGATTCAGCATGTCATAGTGTCC
GTTCATTGCAATGAGTCACTATGTGTTGTGGATTGCCCCAGTGCTATTTG
TATTTTTATGTTGATTCTGCTTCCTCAAGAGAGGCTGCATCAACAAGGAG
TAGATCACTTACTCAGGATTCCATATGAAAGTTTTCTCCATTTTAATTGG
TCAAATAAAGGCTAGAGCCTGTAATTAGGCGATTGAAGAGAAAGGTGGGG
CTGGAGGTTAGAGAATGAAGGAAGAGTTGGGAAGGGGATAGAANGAAGAC
AGNAGAA

GTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXAATAGGAATTCAGTGAGAAGGTTACCTATTCAG
TAACATTCAAATTTACTTCTACCAGAGATGGTGAAACTAATTAGGCATTA
CAAAGAACGTAGCTAGAAGAGCTCAGGGCTAGTCTGCAGAGTGATTACTT
AGGACAGTAGCCAGTCTCACCCAAACAAGGGTATACACAATGGCCTAGCT
AATAGGTGGGTTAACCATGAAAGAATTAGGAAATCCCCCTGAGACAGAAA
TCTTCACTACAATCAGGTATATCAGGCTACATTGCATATTAGAAGCAAGT
TGGTGAATTCTTCTGACAAGTGGAGATTCCCCACAGATACTTAAAAGAAC
AGCCAAGTTACACTCATGCAAGAATTTATCAAGGCCTAGGAAATAGGGGG
TTTGTGGTATTGCATTACTCATGAGAAAGTTTGCTAGAGCAGAACACCCT
GGTGCTAACTTTTACAAGGCTCAAAGGAGTAGCACAAACTGTGACTAGGG
TGTGAAATCCCTATCTGTCATTAGCTGACCCTAAGCAGAGCAGTTTACTG
TTAATATTACCTGGTTCCTGTAAGTCCTTTTAAAGTCATTCCTCTGTTTT
GTGTCAGGTAACTTCAATGTACTTTGACTGCCGTGACATCCTACCCCTTT
GTTTTCTGTATCATATAAGACTGGTGTTCACTTTATGACAATACACTCAG
ATTCTACACACTCTCTCA

Query= MSMg01no514_m16.b1 MSMg01no514_m16.b1 CHROMAT_FILE:
MSMg01no514_m16.b1 PHD_FILE: MSMg01no514_m16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:45:49 2005
         (647 letters)



>mm_chr17_93449288_93450333
          Length = 1046

 Score =  924 bits (478), Expect = 0.0
 Identities = 538/560 (96%), Gaps = 7/560 (1%)
 Strand = Plus / Plus

                                                                       
Query: 89  tttttgtatctgctaccatatagtaagcaaatacatatacaaacaacagatcaacttagc 148
           |||||||||||||||||||||| || |||||||||| | |||||||||||||||||||||
Sbjct: 289 tttttgtatctgctaccatataataggcaaatacatctgcaaacaacagatcaacttagc 348

                                                                       
Query: 149 atggattgtcaacttcaaaatttgtgaaccaaaataaatctttttttctctttttagcaa 208
           |||||||||||||||||||||||||||||||||||||| | ||||| |||||||||||||
Sbjct: 349 atggattgtcaacttcaaaatttgtgaaccaaaataaaccattttt-ctctttttagcaa 407

                                                                       
Query: 209 ttttaaaatttaaatatatgttgatcatattttcacccttccctgaatccttacttatcc 268
           |||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||
Sbjct: 408 ttttaaaatttaaacatattttgatcatattttcacccttctctgaatccttacttatcc 467

                                                                       
Query: 269 ttttcccattctttctcacccaaattgaagttgtttttcaaaagccagacagtactcaca 328
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 468 ttttcccattctttctcacccaaattgaagttctttttcaaaagccagacagtactcaca 527

                                                                       
Query: 329 accacatcaccaaaagaaaacaaatatacaaacaaaccaaaaaatacccaatacacacac 388
           |||||||||||||||||||||||||||||||||||||||||||||||||||    |||||
Sbjct: 528 accacatcaccaaaagaaaacaaatatacaaacaaaccaaaaaatacccaa----cacac 583

                                                                       
Query: 389 acacacacacacacacacacacacacacacacacacacacacacacataatcaccttgga 448
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 584 acacacacacacacacacacacacacacacacacacacacacacacataatcaccttgga 643

                                                                       
Query: 449 agattcagcatgtcatagtgtccgttcattgcaatgagtcactatgtgttgtggattgcc 508
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 644 agattcagcatgtcatagtgtccgttcattgcaatgagtcattatgtgttgtggattgcc 703

                                                                       
Query: 509 ccagtgctatttgtatttttatgttgattctgct-tcctcaagagaggctgcatcaacaa 567
           |||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 704 ccagtgctatttgtatttttatgttgattctgctctc-tcaagagaggctgaatcaacaa 762

                                                                       
Query: 568 ggagtagatcacttactcaggattccatatgaaagttttctccattttaattggtcaaat 627
           |||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 763 ggagtagatcacttactcaggattccatatgaaacttttctacattttaattggtcaaat 822

                               
Query: 628 aaaggctagagcctgtaatt 647
           ||||||||||| ||||||||
Sbjct: 823 aaaggctagagactgtaatt 842


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 73
Number of extensions: 27
Number of successful extensions: 27
Number of sequences better than 10.0: 1
Number of HSP's gapped: 19
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1046
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1036
Effective search space:   659932
Effective search space used:   659932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)