NGGCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXX

TTTTTCCATGCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTATTGCTTGAAAACTGAA
CTAAAAGGAAGTAAATTTCAGGTCTAGTACAAAGTTCATGAAAGACCTCA
ATAAATTCCTCCTTTGTGATTTCAGTACCAGCTTTGTCCTTTGATTTATG
CAATTCTTTGAACTTAAGCTCAATTTTGCTTGTTTTTAGACCAGGATTGA
GGTTTCTGATACACTGGACAGCATGACACAGAGTTATATGTCCAAGACCA
TCTACATCAATTTCACTAAACATTTGTGAAACCCAAGAAGTCCTCATGTT
GTCTTGGCTACTTTCTAGCATATCAAGTGTATGTTTCCCATAAGAAATCA
GGTAGCGGAGTCCTGTCACCCAGATGTTTGCAACATCTGCAGAATTGGCA
ACCAAATCAAGTGACTCATAATTTTCTCCATATATGACTGAAAATGCACA
ATCTTCAGAGATCTGCTCAGAAATGCCATTGCTGCGGAATATATCTGTGT
TCTTTCCTGTTCTCACTTCCTTGATAGATTTGATATCAATCTTGGCTTTC
TCAGAATCCTTCTTAGATGGCTCCCACCTCAGGCTTTGCATGTCGGCGTC
CAGCAGAAAATACCGATGGTAAATTCTGGAGTTAGAACGAACCTTTTTGA
GTTCAGAGCCCTCAACCATTGAGTTGATACAGTCACTTGCGCTGCTGATC
TTCTTCTCTGTCGGCATGCTGC

Query= MSMg01no515_c22.g1 MSMg01no515_c22.g1 CHROMAT_FILE:
MSMg01no515_c22.g1 PHD_FILE: MSMg01no515_c22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:46:23 2005
         (605 letters)



>mm_chr17_50745553_50746557
          Length = 1005

 Score = 1162 bits (601), Expect = 0.0
 Identities = 604/605 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   tttattgcttgaaaactgaactaaaaggaagtaaatttcaggtctagtacaaagttcatg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 tttattgcttgaaaactgaactaaaaggaagtaaatttcaggtctagtacaaagttcatg 746

                                                                       
Query: 61  aaagacctcaataaattcctcctttgtgatttcagtaccagctttgtcctttgatttatg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aaagacctcaataaattcctcctttgtgatttcagtaccagctttgtcctttgatttatg 686

                                                                       
Query: 121 caattctttgaacttaagctcaattttgcttgtttttagaccaggattgaggtttctgat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 caattctttgaacttaagctcaattttgcttgtttttagaccaggattgaggtttctgat 626

                                                                       
Query: 181 acactggacagcatgacacagagttatatgtccaagaccatctacatcaatttcactaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acactggacagcatgacacagagttatatgtccaagaccatctacatcaatttcactaaa 566

                                                                       
Query: 241 catttgtgaaacccaagaagtcctcatgttgtcttggctactttctagcatatcaagtgt 300
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 catttgtgaaatccaagaagtcctcatgttgtcttggctactttctagcatatcaagtgt 506

                                                                       
Query: 301 atgtttcccataagaaatcaggtagcggagtcctgtcacccagatgtttgcaacatctgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atgtttcccataagaaatcaggtagcggagtcctgtcacccagatgtttgcaacatctgc 446

                                                                       
Query: 361 agaattggcaaccaaatcaagtgactcataattttctccatatatgactgaaaatgcaca 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 agaattggcaaccaaatcaagtgactcataattttctccatatatgactgaaaatgcaca 386

                                                                       
Query: 421 atcttcagagatctgctcagaaatgccattgctgcggaatatatctgtgttctttcctgt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcttcagagatctgctcagaaatgccattgctgcggaatatatctgtgttctttcctgt 326

                                                                       
Query: 481 tctcacttccttgatagatttgatatcaatcttggctttctcagaatccttcttagatgg 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctcacttccttgatagatttgatatcaatcttggctttctcagaatccttcttagatgg 266

                                                                       
Query: 541 ctcccacctcaggctttgcatgtcggcgtccagcagaaaataccgatggtaaattctgga 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcccacctcaggctttgcatgtcggcgtccagcagaaaataccgatggtaaattctgga 206

                
Query: 601 gttag 605
           |||||
Sbjct: 205 gttag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 605
Length of database: 1005
Length adjustment: 10
Effective length of query: 595
Effective length of database: 995
Effective search space:   592025
Effective search space used:   592025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)