Query= MSMg01no516_l07.b1 MSMg01no516_l07.b1 CHROMAT_FILE:
MSMg01no516_l07.b1 PHD_FILE: MSMg01no516_l07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:33 2005
(629 letters)
>mm_chr17_80188300_80189330
Length = 1031
Score = 1077 bits (557), Expect = 0.0
Identities = 609/627 (97%), Gaps = 2/627 (0%)
Strand = Plus / Plus
Query: 5 gaattcaactcaagaacttgtttgagtttcattttcagacacagcgagggcaagatctct 64
||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcaactcaagaacttgtctgagtttcattttcagacacagtgagggcaagatctct 264
Query: 65 gtgaagctgaaactgagagcgtttgccctgtgcgctgtctactactgaacgcaatgcagt 124
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct: 265 gtgaagctaaaactgagagcgtttgccctgtgcactgtctactactgaacgcaatgccgt 324
Query: 125 tcacactccttggttgttgcattgcctcctctgctcttcctcttcgtttgtcttggaata 184
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcacactcctcggttgttgcattgcctcctctgctcttcctcttcgtttgtcttggaata 384
Query: 185 atcacatcataatcctattgtcaatatctgaggggtttaggttagggtatgacaaaaaag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 atcacatcataatcctattgtcaatatctgaggggtttaggttagggtatgacaaaaaag 444
Query: 245 --aaaaaaaaatcaaatttagtcattcgcacgtcaaacccacagagtggcattcttcttg 302
|||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||
Sbjct: 445 aaaaaaaaaaatcaaatttagtcattcgcacgccaaacccacagagtgacattcttcttg 504
Query: 303 actggactcagttaggatctgatgcagaagaattaaaaactgtggtgaagaaaatttcag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 actggactcagttaggatctgatgcagaagaattaaaaactgtggtgaagaaaatttcag 564
Query: 363 aaattaacataaaaggtagactggcaaccctcaacctacctgggcttcattcaaccaaag 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 aaattaacataaaaggtagactggcaaccctcaacctacctgggcttcattcaaccaaag 624
Query: 423 gagcatgctcagaaagcccagtctcagaagagctaggcctaggggtgactatggtaagga 482
|||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 625 gagcatgctcagaaagcccagtctcagaagagctaggcataggggtggctatggtaagga 684
Query: 483 cccataaaaggtcactgtggatcaggttttgtccctttcttgtcttcttggaaccaggct 542
|||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||
Sbjct: 685 cccataaaaggtcactgtggatcaggctttgtccctttcttgtcttctaggaaccaggct 744
Query: 543 gcggatgaaaggtggcacacctctgtgtctcccttaataaaatatcctcttccctgtgac 602
|||||||||||||||||||| ||||||||||||||||||||| |||||||||||||| ||
Sbjct: 745 gcggatgaaaggtggcacacttctgtgtctcccttaataaaacatcctcttccctgtaac 804
Query: 603 tacccatgtgtcacgacacaatttgta 629
||||||||||||||| |||||||||||
Sbjct: 805 tacccatgtgtcacggcacaatttgta 831
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1031
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1021
Effective search space: 631999
Effective search space used: 631999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no516_l07.g1 MSMg01no516_l07.g1 CHROMAT_FILE:
MSMg01no516_l07.g1 PHD_FILE: MSMg01no516_l07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:48:33 2005
(626 letters)
>mm_chr17_80359747_80360770
Length = 1024
Score = 594 bits (307), Expect = e-174
Identities = 342/355 (96%), Gaps = 5/355 (1%)
Strand = Plus / Minus
Query: 273 gcacaggcaaagctatagagccagacattaaacttgtggttggtggcactgtaggaagaa 332
|||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||
Sbjct: 1024 gcacaggcaaagctatagagccagacgttaaacttgtggttggtggcactgaaggaagaa 965
Query: 333 aggtctgggatttctttttggagagcttaaaaaaaaattaaaatcctaaaattgatcaga 392
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 964 aggtctgggatttctttttggagagctt--aaaaaaattaaaatcctaaaattgatcaga 907
Query: 393 gtgtggttgtacaactctgaatatggt-aaaaaaataaaccactgaagtatgtactttaa 451
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 906 gtgtggttgtacaactctgaatatggtaaaaaaaacaaaccactgaagtatgtactttaa 847
Query: 452 ataaatgtaaactgtatggtataggtatagtaaagcttttggggcggggggggaagaaga 511
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 846 ataaatgtaaactgtatggtataggtatagtaaagcttttggggc--ggggggaagaaga 789
Query: 512 gaaatacgtagaaaagtgttcggccaagaggctaggtagaagctacctgtccaggatgcc 571
||||||||||||||||||||| |||||| ||||||||||| |||||||||||||||||||
Sbjct: 788 gaaatacgtagaaaagtgttcagccaagcggctaggtagaggctacctgtccaggatgcc 729
Query: 572 tatatctatttgtgaggtccacattgccacgccttaccgtagttcagcatctgca 626
|||||||||||||||||| ||||||||||||||||| ||||||||||||||||||
Sbjct: 728 tatatctatttgtgaggttcacattgccacgccttatcgtagttcagcatctgca 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1024
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1014
Effective search space: 624624
Effective search space used: 624624
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
