Query= MSMg01no518_j16.b1 MSMg01no518_j16.b1 CHROMAT_FILE:
MSMg01no518_j16.b1 PHD_FILE: MSMg01no518_j16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:03 2005
(668 letters)
>mm_chr17_28007737_28008804
Length = 1068
Score = 677 bits (350), Expect = 0.0
Identities = 350/350 (100%)
Strand = Plus / Plus
Query: 5 gaattctgcaggtgccatgtgcagtattataggaacccctccatataacataaatagaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcaggtgccatgtgcagtattataggaacccctccatataacataaatagaaa 264
Query: 65 aaccctagtcttttacagaaataagagaactttcctgtaggtcctagcttcctcttcatt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aaccctagtcttttacagaaataagagaactttcctgtaggtcctagcttcctcttcatt 324
Query: 125 ctgaaaaacgtcctgcagtaagtataccttgtattggggctagaatcctcagttttacaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctgaaaaacgtcctgcagtaagtataccttgtattggggctagaatcctcagttttacaa 384
Query: 185 ctaataatatctctatctcatctattttgtcttagttaattttctactgctgtgataaaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctaataatatctctatctcatctattttgtcttagttaattttctactgctgtgataaaa 444
Query: 245 caccaagatcaagagaactttaggatagtagttttatttttagcttacggtatgtttttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caccaagatcaagagaactttaggatagtagttttatttttagcttacggtatgtttttc 504
Query: 305 ttttgcctgaatgtatgtcttgtgcatcatgtgtgtgctgtgctggagga 354
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttttgcctgaatgtatgtcttgtgcatcatgtgtgtgctgtgctggagga 554
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no518_j16.g1 MSMg01no518_j16.g1 CHROMAT_FILE:
MSMg01no518_j16.g1 PHD_FILE: MSMg01no518_j16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:03 2005
(443 letters)
>mm_chr17_27851384_27852225
Length = 842
Score = 841 bits (435), Expect = 0.0
Identities = 441/443 (99%), Gaps = 1/443 (0%)
Strand = Plus / Plus
Query: 1 cacagtccaagcccggctccgtttgtgaacaatcctagctccctcgatcttcctggggcc 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagtccaagcccggttccgtttgtgaacaatcctagctccctcgatcttcctggggcc 260
Query: 61 tgtgtatgacccagagagctcatgtgtatccctagatcagtggctgtctatctgggacct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtgtatgacccagagagctcatgtgtatccctagatcagtggctgtctatctgggacct 320
Query: 121 tgggttctgggataccagcagcccctgaattcagagtgagcagagaggaccaggccaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgggttctgggataccagcagcccctgaattcagagtgagcagagaggaccaggccaacc 380
Query: 181 agagagtggctgcctggggcaggttgtaggcctctggtctctgtggctctcagactggat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agagagtggctgcctggggcaggttgtaggcctctggtctctgtggctctcagactggat 440
Query: 241 gcacaaattggtagacaaggcgctgagagatgtcgggtttacgaatgatgcccttcttgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcacaaattggtagacaaggcgctgagagatgtcgggtttacgaatgatgcccttcttgt 500
Query: 301 aatactggcggatggagcggcttagtttatcatagttcatggctggccggttcttgcgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aatactggcggatggagcggcttagtttatcatagttcatggctggccggttcttgcgca 560
Query: 361 caccccacagtcgggccacctgtgctgagtcctcaattttgaagatgcctggggaggggg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 caccccacagtcgggccacctgtgctgagtcctcaattttgaagatgcctggggaggggg 620
Query: 421 gaaggaaggaggngagggtggga 443
|||||||||||| ||||||||||
Sbjct: 621 gaaggaaggagg-gagggtggga 642
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 842
Length adjustment: 10
Effective length of query: 433
Effective length of database: 832
Effective search space: 360256
Effective search space used: 360256
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
