Query= MSMg01no519_e13.b1 MSMg01no519_e13.b1 CHROMAT_FILE:
MSMg01no519_e13.b1 PHD_FILE: MSMg01no519_e13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:57 2005
(550 letters)
>mm_chr17_47535716_47536666
Length = 951
Score = 1004 bits (519), Expect = 0.0
Identities = 543/551 (98%), Gaps = 1/551 (0%)
Strand = Plus / Plus
Query: 1 agacttgtcttgaccccaagggcttcccttaacaggaggagacaagatgttccagtgtgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agacttgtcttgaccccaagggcttcccttaacaggaggagacaagatgttccagtgtgt 260
Query: 61 tgtgggtaggtgctgggatccctcccaacctggctgggaggaccactgcttcccctgagc 120
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 261 tgtgggtaggtgctgggatccctcccaacctggccaggaggaccactgcttcccctgagc 320
Query: 121 actttgggaggaccactgctccccccaagtactgcaggaggaccactacttccccggagc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 321 actttgggaggaccactgctccccccaagtactgcaggaggaccactgcttccccggagc 380
Query: 181 actttggggtgtccaccctcatttctccttcaccttatcaccctatcccgggctctctgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actttggggtgtccaccctcatttctccttcaccttatcaccctatcccgggctctctgg 440
Query: 241 ccatctccttcagaagagcccttagagcggggacactgcccttgggctggttctttagct 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 ccatctccttcagaagagcccttagagcggggacactgcccttgggctggttctttagtt 500
Query: 301 cccgtaatccgactgggcctcttaactcatgtattagtgagttttaaataaccacacagg 360
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cccgtaatccgattgggcctcttaactcatgtattagtgagttttaaataaccacacagg 560
Query: 361 gatcttggtgttccctagaaacaccgaccacagtggtgttcttgaggggaggggcgcccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatcttggtgttccctagaaacaccgaccacagtggtgttcttgaggggaggggcgcccc 620
Query: 421 ctgccacaatggccacatggccggccctatatcactgatagaacccatgtcccagtgagg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ctgccacaatggccacatggccggccctatatcactgatagaacccatgtcccagtgagg 680
Query: 481 ggccagcccatctgaggatcagcagacagagcataagcatgtgtgtggctttggattcc- 539
|||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 ggccagcccagctgaggatcagcagacagagcataagcaggtgtgtggctttggattcca 740
Query: 540 ccatctttata 550
|||||||||||
Sbjct: 741 ccatctttata 751
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 550
Length of database: 951
Length adjustment: 10
Effective length of query: 540
Effective length of database: 941
Effective search space: 508140
Effective search space used: 508140
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_e13.g1 MSMg01no519_e13.g1 CHROMAT_FILE:
MSMg01no519_e13.g1 PHD_FILE: MSMg01no519_e13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:51:57 2005
(689 letters)
>mm_chr17_47686058_47687146
Length = 1089
Score = 1265 bits (654), Expect = 0.0
Identities = 681/692 (98%), Gaps = 4/692 (0%)
Strand = Plus / Minus
Query: 1 attatgttgctgaggagaaccttgaataactgatcattttcccaaaatgccaggattact 60
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 948 attatgttgctgaggagaaccttgaataactgatcatttccccaaaatgccaggattact 889
Query: 61 ggtgtgggccattatgcctggctctgggctagaaattactaaagtggaaaagacaagatg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 888 ggtgtgggccattatgcctggctctgggctagaaattactaaagtggaaaagacaagatg 829
Query: 121 gtagaaaaattcaagggtctcatggaccaaaggctgaccccactggacctttgatgtccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 828 gtagaaaaattcaagggtctcatggaccaaaggctgaccccactggacctttgatgtccc 769
Query: 181 atactgcatgtcccaagccctgatagcaaaagaaggcaaattctgggctggatgatggca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 768 atactgcatgtcccaagccctgatagcaaaagaaggcaaattctgggctggatgatggca 709
Query: 241 acggtgtccccaaggcagccatggtagagactagctagaggctccctggttctggtaact 300
|| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 708 acagtgtccccaaggcagccatggtagaggctagctagaggctccctggttctggttcct 649
Query: 301 taccgaggatgcccagggaaactacacttcccagtttcccttgcagttcacgggctttgg 360
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 648 taccgaggatgcccagggaaactacacttcccagtttcccttgcagttcatgggctttgg 589
Query: 361 gtgagggtggggtctgaccacagacctcagtttgaatcctgagagcctgcatagaagtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 588 gtgagggtggggtctgaccacagacctcagtttgaatcctgagagcctgcatagaagtca 529
Query: 421 agcatggactgtgcatctattagacccacactcttacgggagaggaaagcagagcagatg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 agcatggactgtgcatctattagacccacactcttacgggagaggaaagcagagcagatg 469
Query: 481 gtcctcagaagcacaggtctggttaagtccagagaccctgcttcaaacaaggaaggtggt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 468 gtcctcagaagcacaggtctggttaagtccagagaccctgcttcaaacaaggaaggtggt 409
Query: 541 gagaagtgatacccatgatactcaaggttgtcctgctgtctgcttgacctccacaggccg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 gagaagtgatacccatgatactcaaggttgtcctgctgtctgcttgacctccacaggccg 349
Query: 601 gctatggcctatacacctatacacccactcttacacgttacacgtgaacacatgcctgga 660
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 348 gctatggcctatacacctatacacccactcttacacgttacacgtgaacacatgcctgta 289
Query: 661 ctcctctctctctctctctct----ttctctc 688
||||||||||||||||||||| |||||||
Sbjct: 288 ctcctctctctctctctctctctctttctctc 257
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 62
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1089
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1079
Effective search space: 732641
Effective search space used: 732641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
