Query= MSMg01no519_p23.b1 MSMg01no519_p23.b1 CHROMAT_FILE:
MSMg01no519_p23.b1 PHD_FILE: MSMg01no519_p23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:54 2005
(624 letters)
>mm_chr17_12706028_12707050
Length = 1023
Score = 1168 bits (604), Expect = 0.0
Identities = 616/620 (99%), Gaps = 1/620 (0%)
Strand = Plus / Plus
Query: 5 gaattctgctttcttcctcaagtatctgctgaaatcgggagatttcccactttggtaaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgctttcttcctcaagtatctgctgaaatcgggagatttcccactttggtaaaa 264
Query: 65 gctgctgctccaattgtaacttccatacttttacttcacttcactcacaaatttgcaaaa 124
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gctgctgctccaatcgtaacttccatacttttacttcacttcactcacaaatttgcaaaa 324
Query: 125 gttacatttctgcaactgtgaccaaaagtctgagacaatgaacttaaagagagtggggag 184
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 325 gttacatttctgcaactgtgaccaaaagtccgagacaatgaacttaaagagagtggggag 384
Query: 185 tcaagtttgacagttttctttgttcctgttgttggggaggggcatgtagccggagaagct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcaagtttgacagttttctttgttcctgttgttggggaggggcatgtagccggagaagct 444
Query: 245 gtcaccttgtggtctacactccaaagagaaaggaaggggagtcatatattgcttatctct 304
||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 445 gtcaccttgtggtctacactccaaagagaaaggaa-gggagtcataaattgcttatctct 503
Query: 305 cctccaacggcctgtcaccttgtggtctacacaccaaagagaaaggaaggggagtcataa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cctccaacggcctgtcaccttgtggtctacacaccaaagagaaaggaaggggagtcataa 563
Query: 365 attgcttatctctcctccaacggcctaagacctcctactagactcttcttaaaggtttcc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attgcttatctctcctccaacggcctaagacctcctactagactcttcttaaaggtttcc 623
Query: 425 acactctgaaggtcctaggatggatgaggactaagcttttgtgtgtgggctcctggagag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 acactctgaaggtcctaggatggatgaggactaagcttttgtgtgtgggctcctggagag 683
Query: 485 tactctaggtcagagttcagcattaccttgcctcttacactcacaacataagtcccctta 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tactctaggtcagagttcagcattaccttgcctcttacactcacaacataagtcccctta 743
Query: 545 caaggggtgtggttgtgaactttatatagtgtgtcactttcatcctcagagccatactag 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 caaggggtgtggttgtgaactttatatagtgtgtcactttcatcctcagagccatactag 803
Query: 605 ccaggcacctcctggaaagg 624
||||||||||||||||||||
Sbjct: 804 ccaggcacctcctggaaagg 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1023
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1013
Effective search space: 621982
Effective search space used: 621982
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no519_p23.g1 MSMg01no519_p23.g1 CHROMAT_FILE:
MSMg01no519_p23.g1 PHD_FILE: MSMg01no519_p23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:52:54 2005
(342 letters)
>mm_chr17_12893183_12893922
Length = 740
Score = 644 bits (333), Expect = 0.0
Identities = 337/339 (99%), Gaps = 2/339 (0%)
Strand = Plus / Minus
Query: 1 cttggaatactgaaggggaaagtcacccacagtcccacctcagggtgatgcttttttaac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 cttggaatactgaaggggaaagtcacccacagtcccacctcagggtgatgcttttttaac 478
Query: 61 ttcattctcagggtatagggcacaggtgcctggagaataggaatgctcagagttcctagt 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 477 ttcattctcagggtatagggcacaggtgcctggagaataggaatgct--gagttcctagt 420
Query: 121 aatgtattgactaaagagtgagaatgtaggctctgagagtgctcccttgcgttgaggact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 aatgtattgactaaagagtgagaatgtaggctctgagagtgctcccttgcgttgaggact 360
Query: 181 ctgaccttaccttgcgcagtgttttgaaatgatggcgcggggtgggtgtggaggggttgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctgaccttaccttgcgcagtgttttgaaatgatggcgcggggtgggtgtggaggggttgg 300
Query: 241 ataataccataccttgagctgcactttgcactgtaggagactgcagtcaccccaggagac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 ataataccataccttgagctgcactttgcactgtaggagactgcagtcaccccaggagac 240
Query: 301 tctgattgtatcttgtgttgcagagccatgccctccaga 339
|||||||||||||||||||||||||||||||||||||||
Sbjct: 239 tctgattgtatcttgtgttgcagagccatgccctccaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 740
Length adjustment: 9
Effective length of query: 333
Effective length of database: 731
Effective search space: 243423
Effective search space used: 243423
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
