Query= MSMg01no520_g12.b1 MSMg01no520_g12.b1 CHROMAT_FILE:
MSMg01no520_g12.b1 PHD_FILE: MSMg01no520_g12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:27 2005
(636 letters)
>mm_chr17_47754376_47755412
Length = 1037
Score = 1139 bits (589), Expect = 0.0
Identities = 622/633 (98%), Gaps = 1/633 (0%)
Strand = Plus / Plus
Query: 5 gaattccatactactcttcgatccatagtaagaccccgtcctaaacaaaaaaaggagtct 64
|||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||
Sbjct: 205 gaattccatactactcagggatccatagtaagaccccgtcttaaacaaaaaaaggagtct 264
Query: 65 agaatgccagttgaatgagtgagtgggctagggctgtcgagtggagagtgctacctgagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agaatgccagttgaatgagtgagtgggctagggctgtcgagtggagagtgctacctgagc 324
Query: 125 atgtgcaacactctatctatagaacatgggttctatctctaacacacagaggaagcaaca 184
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 325 atgtgcaacactctatctatagaacacgggttctatctctaacacacagaggaagcaaca 384
Query: 185 aggagtctgagccaactttggtagcacacacttctaactccagcattaggagttggtcac 244
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aggagactgagccaactttggtagcacacacttctaactccagcattaggagttggtcac 444
Query: 245 acccaggcctgcctgggtaagatagcaagaccctgttcaaaccaaataaaacaatagact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acccaggcctgcctgggtaagatagcaagaccctgttcaaaccaaataaaacaatagact 504
Query: 305 gaggaaactcatttctcagagagtggaatggggcttgaaagtacagcttcaaatcctagt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaggaaactcatttctcagagagtggaatggggcttgaaagtacagcttcaaatcctagt 564
Query: 365 gcccgggttcatcatagctttcctagcatctcaactaaacagtcatgaacactcgtcctt 424
|||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gcccggtttcgtcatagctttcctagcatctcaactaaacagtcatgaacactcgtcctt 624
Query: 425 acctgcaggcggcactggcagcttttaaaggcaaggcagaaaaaacttgactcagcttga 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 acctgcaggcggcactggcagcttttaaaggcaaggcagaaaaaacttgactcagcttga 684
Query: 485 ctgtggtctactgtcccagcctactgttcataggctccctattgcaaagcctctgtaaga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 ctgtggtctactgtcccagcctactgttcataggctccctattgcaaagcctctgtaaga 744
Query: 545 gcatttagatttcaaaggcagcattgacagggtccagagag-catgcggatgtttccctt 603
|||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||||||
Sbjct: 745 gcatttagatttcaaaggcagcattggcagggtccagagaggcatgccgatgtttccctt 804
Query: 604 ctgttttatggttgaggttctagggctggaact 636
|||||||||||||||||||||||||||||||||
Sbjct: 805 ctgttttatggttgaggttctagggctggaact 837
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 636
Length of database: 1037
Length adjustment: 10
Effective length of query: 626
Effective length of database: 1027
Effective search space: 642902
Effective search space used: 642902
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no520_g12.g1 MSMg01no520_g12.g1 CHROMAT_FILE:
MSMg01no520_g12.g1 PHD_FILE: MSMg01no520_g12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:53:27 2005
(631 letters)
>mm_chr17_47919615_47920647
Length = 1033
Score = 1193 bits (617), Expect = 0.0
Identities = 629/633 (99%), Gaps = 2/633 (0%)
Strand = Plus / Minus
Query: 1 atcccctcccctgggagcatcctggcagataatgtaaacagtgaaagtctagctgatcgc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 833 atcccctcccctgggagcatcctggcagataatgtaaacagtgaaagtctagctgacctc 774
Query: 61 tgaatgtcagtgaccactg-g-gaggaggcaggcagaaaatactttcccgctccccagca 118
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct: 773 tgaatgtcagtgaccactgagagaggaggcaggcagaaaatactttcccgctccccagca 714
Query: 119 cctcctgggcagagctatgcaccccatattcctgatggcaaatctctaacctcccttact 178
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 cctcctgggcagagctatgcaccccatattcctgatggcaaatctctaacctcccttact 654
Query: 179 gggcttgggagaatggggaagggtcaaaggctagctactgaggactgggaaggagagacc 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 gggcttgggagaatggggaagggtcaaaggctagctactgaggactgggaaggagagacc 594
Query: 239 ctgtatgctgatcaacctcagtgccttccagtcaggatgagccaagagacagggaatgtc 298
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 ctgtatgctgatcaacctcagtgccttccagtcaggatgagccaagagacagggaatgtc 534
Query: 299 caaagtctatgtctctctcttcctttccccccaagactggaaaggacccactgcgaaagc 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 caaagtctatgtctctctcttcctttccccccaagactggaaaggacccactgcgaaagc 474
Query: 359 ccagcagcatgggacccacggcaacgcaactgtgtacaggtaccaggacagaattttctc 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ccagcagcatgggacccacggcaacgcaactgtgtacaggtaccaggacagaattttctc 414
Query: 419 ctgcctcctacctcttacagcaccaactcctaaggggaaggctcagtggcactagaaagt 478
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 ctgcctcctacctcttacagcaccaactcctaaggggaaggctcagtggcactagaaagt 354
Query: 479 ctctgcctctcccagtggcactgccaaccccatctgcataccaggacccatctggtactt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 ctctgcctctcccagtggcactgccaaccccatctgcataccaggacccatctggtactt 294
Query: 539 ccagctgctgtctgtccaggtccagcttggtcacaacccagtgagctcgccaggccagca 598
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ccagctgctgtctgtccaggtccagcttggtcacaacccagtgagctcgccaggccagca 234
Query: 599 gactaccttcactggctgagtgacacggggatg 631
|||||||||||||||||||||||||||||||||
Sbjct: 233 gactaccttcactggctgagtgacacggggatg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 631
Length of database: 1033
Length adjustment: 10
Effective length of query: 621
Effective length of database: 1023
Effective search space: 635283
Effective search space used: 635283
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
