Query= MSMg01no522_e12.b1 MSMg01no522_e12.b1 CHROMAT_FILE:
MSMg01no522_e12.b1 PHD_FILE: MSMg01no522_e12.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:51 2005
(460 letters)
>mm_chr17_29234185_29235044
Length = 860
Score = 625 bits (323), Expect = 0.0
Identities = 345/363 (95%), Gaps = 17/363 (4%)
Strand = Plus / Minus
Query: 112 gtgattaactccatcaggccaatcaaaagtaccctggacagccgggcgtggtggcacatg 171
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 860 gtgattaactccatcaggccaatcaaaagtaccctggacagccgggcgtggtggcacacg 801
Query: 172 cctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcct 231
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 cctttaatcccagcactcgggaggcagaggcaggcggatttctgagttcgaggccagcct 741
Query: 232 ggtctacaaagtgagttccaggacagccagggctatacagagacatcctgtctc------ 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 ggtctacaaagtgagttccaggacagccagggctatacagagacatcctgtctcaaaaaa 681
Query: 286 -----------aaaaaaaaaaaaaaaaaaaaagtgccctggactttgggatactacacat 334
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 aaaaaaaaaaaaaaaaaaaaaaaaaaaaaaaagtgccctggactttgggatactacacat 621
Query: 335 aaactgtatagcattagtgctgctacttggcaccagttttaaaaagtgactccatgtctc 394
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 aaactgtatagcattagtgctgctacttggcaccagttttaaaaagtgactccatgtctc 561
Query: 395 cagcctctgtttcttagccagtgtggttgtggcagcatactcgcgaggctggcatggtgg 454
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 cagcctctgtttcttagccagtgtggttgtggcagcatactcgcgaggctggcatggtgg 501
Query: 455 ctg 457
|||
Sbjct: 500 ctg 498
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 44
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 460
Length of database: 860
Length adjustment: 10
Effective length of query: 450
Effective length of database: 850
Effective search space: 382500
Effective search space used: 382500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_e12.g1 MSMg01no522_e12.g1 CHROMAT_FILE:
MSMg01no522_e12.g1 PHD_FILE: MSMg01no522_e12.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:51 2005
(368 letters)
>mm_chr17_29063698_29064465
Length = 768
Score = 673 bits (348), Expect = 0.0
Identities = 361/366 (98%), Gaps = 2/366 (0%)
Strand = Plus / Plus
Query: 5 tacagagctggctagcaagactggttggatcagcaaggtctaggttaagtgggagctcag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tacagagctggctagcaagactggttggatcagcaaggtctaggttaagtgggagctcag 262
Query: 65 cctcaaggtctaaggtgaaacctgacacccaaggccccaccttaggcgtccacatgcatg 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 263 cctcaaggtctaaggtgaaacgtgacacccaaggccccaccttaggcgtccacatgcatg 322
Query: 125 cacaggcacacacatgaatgtgtacctgcattggtaggagacccacacatatacaaacac 184
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 323 cacaggcacacacatgaatgtgtacctgcatgggtaggagacccacacatatacaaacac 382
Query: 185 gggtactgtgtccaagcacatacgcacacaggcacacacacaca--tatgcacagtacgc 242
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 383 gggtactgtgtccaagcacatacgcacacaggcacacacacacacatatgcacagtacgc 442
Query: 243 acatatgcacactcagaaacataagctgtcacggtagtgcttgcttgccttgaagctcag 302
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 443 acatatgcacactcagaaacataagctgttacggtagtgcttgcttgccttgaagctcag 502
Query: 303 tacttgagaggcagaaacagggttgctgcaagtttgaggccagtctaggctacacagtga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 tacttgagaggcagaaacagggttgctgcaagtttgaggccagtctaggctacacagtga 562
Query: 363 gtgcta 368
||||||
Sbjct: 563 gtgcta 568
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
