NNTTTCTTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTTTGTATATAATGGATATAAGTCTTCTATCAGATGTAGG
ATTGGTAAAAATCTTTTCCCAATCTGTTGGTTGACTTTTTGTCCTGTTGA
CAGTGTCCTTTGCCTTTCAGAAGCTTTGCAATTTTATGAGGTCCTATTTG
TTGATTCTTGATCTTAGAGCATAAGCCATTGGAGTTCTGTTCAGGAAATT
TTTCCCTGTGTCCATGTGTTCCAGGCTCTTCCCCACGTTCTCCTCTATAA
GTTTCAGTGTATCTAGTTTAAGTGGAGGTTCTTGATCCACTTGGATGTGA
GATTTATACAAGGTGGTAAGAATGTGTTGATTTGCATTTTTTACATGCTG
ACTGCCAGTTGAACCAGCACAATTTGTTAAAAATGCTGTCTTTTTTTCTT
CCTGGTCCTTGCTGCTGGGGCAGACCCCTAGTAGGTCTGCTCCCATGAAG
ACTCCATATCCTAATCCATCCTAGAGAACCTCCTGCACTCAAAGCAGTTG
GTGTGAAACTCCCACCCCCAGCCTGAGTTCCAGAGTTGTTGATGGGAGCC
TGGGGGACTCAGGACCCATCACCCACCAAACCCCTGCCTTCCTGAATATC
ACTCTTTCTGTCCCTTCCATCCCTTCTGCCCTGTCCTTGCTGCTTAGACA
GAACCCTAGTTAGTCTACTCCCATGAAGACTCCATATCCTAATTCATCCT
A

NGTTCGCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATCATGATCTAAGTAGAC
AAGGCATCTGTTACTAAAAGGTAGGACTTTTAAAAGTAGACAAAGACGAA
GAGTTTTAGAGTTTTCAAAAATTCCTGCACTCTTGAGCAGTAAATCAATT
TGCCCTCAGGGCCTATTTTCTTTTTGTCCTAGAAGAAACTAGTTGTCAAA
TAAATCTATGAAGCTAATTATTCAGTCACTTGGTTGGTTTATCTTTTGAA
CATTTTTCTGTTACTTTGGAAAAAAGTGAAGCCAAGTGCAAATGCTATAG
AATGAGAGGCTAATTAGTCTGTGTGAGTCCGGGGAGGGGATTGGGAACAG
GCAGGAAGAACTGATCCTTGTCAAACTAGGGGACATTAACTAAGTGTCCA
AATCTAAATAGGGTGATTATCATCCATATCTTGACTTAGCCATCCTTTGT
GTAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAATAAAT
AGTGAAATGTATAAAATAAATTGCAGGTTGAAGAAAGAGAACGATGCATT
AAGATGTAACAGAAGTTTTAAAATGAAAGTAAAGCATAAAAACAAAATTT
CCTTCTTATATGCCTGAAGTCATAAAAAGGGAGGAGAGAAATTAACTTTT
TAAAGATGGAAAAGATGAAAAAAACCACCAGACATATTTTAATGATTTAG
TACAAN

Query= MSMg01no522_g01.g1 MSMg01no522_g01.g1 CHROMAT_FILE:
MSMg01no522_g01.g1 PHD_FILE: MSMg01no522_g01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:55:58 2005
         (633 letters)



>mm_chr17_41894668_41895700
          Length = 1033

 Score = 1203 bits (622), Expect = 0.0
 Identities = 631/634 (99%), Gaps = 2/634 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atcatgatctaagtagacaaggcatctgttactaaaaggtaggacttttaaaagtagaca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atcatgatctaagtagacaaggcatctgttactaaaaggtaggacttttaaaagtagaca 260

                                                                       
Query: 61  aagacgaagagttttagagttttcaaaaattcctgcactcttgagcagtaaatcaatttg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagacgaagagttttagagttttcaaaaattcctgcactcttgagcagtaaatcaatttg 320

                                                                       
Query: 121 ccctcagggcctattttctttttgtcctagaagaaactagttgtcaaataaatctatgaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctcagggcctattttctttttgtcctagaagaaactagttgtcaaataaatctatgaa 380

                                                                       
Query: 181 gctaattattcagtcacttggttggtttatcttttgaacatttttctgttactttggaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gctaattattcagtcacttggttggtttatcttttgaacatttttctgttactttggaaa 440

                                                                       
Query: 241 aaagtgaagccaagtgcaaatgctatagaatgagaggctaattagtctgtgtgagtccgg 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaagtgaagccaagtgcaaatgctatagaatgagaggctaattagtctgtgtgagtccgg 500

                                                                       
Query: 301 ggaggggattgggaacaggcaggaagaactgatccttgtcaaactaggggacattaacta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggaggggattgggaacaggcaggaagaactgatccttgtcaaactaggggacattaacta 560

                                                                       
Query: 361 agtgtccaaatctaaatagggtgattatcatccatatcttgacttagccatcctttgtgt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agtgtccaaatctaaatagggtgattatcatccatatcttgacttagccatcctttgtgt 620

                                                                       
Query: 421 aaataaaataaaataaaataaaataaaataaaataaaataaa-ataaatagtgaaatgta 479
           |||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||
Sbjct: 621 aaataaaataaaataaaataaaataaaataaaataaaataaagataa-tagtgaaatgta 679

                                                                       
Query: 480 taaaataaattgcaggttgaagaaagagaacgatgcattaagatgtaacagaagttttaa 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 taaaataaattgcaggttgaagaaagagaacgatgcattaagatgtaacagaagttttaa 739

                                                                       
Query: 540 aatgaaagtaaagcataaaaacaaaatttccttcttatatgcctgaagtcataaaaaggg 599
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 740 aatgaaagtaaagcataaaaacaaaatttctttcttatatgcctgaagtcataaaaaggg 799

                                             
Query: 600 aggagagaaattaactttttaaagatggaaaaga 633
           ||||||||||||||||||||||||||||||||||
Sbjct: 800 aggagagaaattaactttttaaagatggaaaaga 833


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 7
Number of successful extensions: 7
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space:   637329
Effective search space used:   637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)