NNNNNNNCCCCTXXXXXXXXXXXXXXXXXXXXXXXXXXXXTGTCANAGGA
ACGCGGAANNCNCACCTGAGTCCTACCGAATGGCAGAGAAGCACCTGAAA
AAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCT
AAGATTCCACCTCACACCAGTCAGAATGTCTAAGATCAAAAATTCAGGTG
ACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGT
TGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCCGTCTGGCGGTT
CCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCC
TGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCC
ACTATGTTCATAGCAGCATTATTTATAATAGCCAGAAGCTGGAAAGAACC
CAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACA
CAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTA
GCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTC
ACAAAGGAACTCACACAATATGTACTCACTGATAAGTGGATATTAGCCCA
AAACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACATGAAAA
CTCAGAAAAATGAAGACTNGAGTGGGGACACTATGCCCCCTCTTTAGAGT
GGAACAAACACCCTTGGAAAGAGTTACN

TTTTNNTCTATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCTCGTGGGTAGCATCCTTTC
GGGGGTGGGGGGAGAGCATATTATTCCAAGTGTCAGTTGTGAGAGGCATT
GCTCAGTGGTCTCTGTGTATGCCACAAATGCTCTGCAGGGAAGAGCCAAG
TTGCAAACGGTTCCCCAGAAGTGCATCTCTCTACAGTGATCTCATAGCCT
CTGAGAAGAGGAAGACTTCCTCTAGGTGGGTGGGATGCAGGTTAGGAAAG
AAGATGAGGGAAGGCTAAGACTTGACTCTAAAGATGGTTCACTCTCATCT
GTAAGCTGGCTTGGTGGTTATCTTCTCAGTGGGGTTCAGTGGGAAAAGCG
ATCACTGGGCAGTGATGTGACCCTGGGCACATCTTTAAGATGACCCTTGT
GTGGCATCCCCTTCGAGGATCTGCAGCTCATGCCTGATCCCTGCAGTTGT
TCTCATGGAGAGGAAAAGAGTTTTACATTTTTCTCAGGCTCCATACAGCC
CCTCTTTCCATCTGAGGAAAGGGATGTCATCATTGTTGGAAACGAGTTCC
AGGGATGCCATCACTGTTAATCCCAGCAAGTCCTGTGGTCACCATCTGTT
TAGCTAAGCCTCTATGTGGTTTACAAGCCTCGATAGTTTCTTTTTGTTCA
ACCTTAAGAGAATCAAACAACCTACTCTTCTGTAGNCACAGTAACAGCGA
TGGCTGCGTCCTAC

Query= MSMg01no522_l23.g1 MSMg01no522_l23.g1 CHROMAT_FILE:
MSMg01no522_l23.g1 PHD_FILE: MSMg01no522_l23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:26 2005
         (589 letters)



>mm_chr17_72592601_72593593
          Length = 993

 Score =  955 bits (494), Expect = 0.0
 Identities = 562/606 (92%), Gaps = 37/606 (6%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctcgtgggtagcatcctttcgggggtggggggagagcatattattccaagtgtcagttgt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctcgtgggtagcatcctttcgggggtggggggagagcatattattccaagtgtcagttgt 260

                                                                       
Query: 61  gagaggcattgctcagtggtctctgtgtatgccacaaatgctctgcagggaagagccaag 120
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagaggcattgctcagtggtctccgtgtatgccacaaatgctctgcagggaagagccaag 320

                                                                       
Query: 121 ttgcaaacggttccccagaagtgcatctctctacagtgatctcatagcctctgagaagag 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgcaaacggttccccagaggtgcatctctctacagtgatctcatagcctctgagaagag 380

                                                                       
Query: 181 gaagacttcctctaggtgggtgggatgcaggttaggaaagaagatgagggaaggctaaga 240
           |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 381 gaagacttcctctaggtgggtgggttgcaggttaggaaagaagatgagggaaggctaaga 440

                                                                       
Query: 241 cttgactctaaagatggttcactctcatctgtaagctggcttggtggttatcttctcagt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgactctaaagatggttcactctcatctgtaagctggcttggtggttatcttctcagt 500

                                                                       
Query: 301 ggggttcagtgggaaaagcgatcactgggcagtgatgtgaccctgggcacatctttaaga 360
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ggggctcagtgggaaaagcgatcactgggcagtgatgtgaccctgggcacatctttaaga 560

                                                                       
Query: 361 tgac----ccttgtgtggcatccccttcgaggatctgcagctcatgcct----------- 405
           ||||    |||||||||||||||||||||||||||||||||||||||||           
Sbjct: 561 tgactgacccttgtgtggcatccccttcgaggatctgcagctcatgcctcacaattatgc 620

                                                                       
Query: 406 --gatccctgcagttgttctcatggagaggaaaagagttttacatttttctcaggctcca 463
             ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tggatccctgcagttattctcatggagaggaaaagagttttacatttttctcaggctcca 680

                                                                       
Query: 464 tacagcccctctttccatctgaggaaagggatgtcatcattgttggaaacgagttccagg 523
           ||||||||||||||||||||||||||   ||   |              |||||||||||
Sbjct: 681 tacagcccctctttccatctgaggaa---ga---c--------------cgagttccagg 720

                                                                       
Query: 524 gatgccatcactgttaatcccagcaagtcctgtggtcaccatctgtttagctaagcctct 583
           |||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct: 721 gatgccatcactgttaatcccagcaagtcctgcggtcaccatctatttagctaagcctct 780

                 
Query: 584 atgtgg 589
           ||||||
Sbjct: 781 atgtgg 786


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 993
Length adjustment: 10
Effective length of query: 579
Effective length of database: 983
Effective search space:   569157
Effective search space used:   569157
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)