Query= MSMg01no522_p20.b1 MSMg01no522_p20.b1 CHROMAT_FILE:
MSMg01no522_p20.b1 PHD_FILE: MSMg01no522_p20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:45 2005
(506 letters)
>mm_chr17_87086286_87087193
Length = 908
Score = 884 bits (457), Expect = 0.0
Identities = 492/505 (97%), Gaps = 4/505 (0%)
Strand = Plus / Plus
Query: 5 aaaaaaagccacgagaatgacagagaga---ttgcccaatacaagagccatgtgccaagt 61
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 205 aaaaaaagccacgagaatgacagagagaagattgcccaatacaagagccatgtgccaagt 264
Query: 62 acagaggtcaaagagagagaactggacaaggacaggagagtcagaaggcaggtccctgca 121
|||||||||||||||||||| |||||||||| |||||||||| |||||||||||||||||
Sbjct: 265 acagaggtcaaagagagagacctggacaaggtcaggagagtctgaaggcaggtccctgca 324
Query: 122 gagactctgtggagggaaaacctgatggacccgaacacatggagaagagacttacacagc 181
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gagactccgtggagggaaaacctgatggacccgaacacatggagaagagacttacacagc 384
Query: 182 ccaggctggggtctgaagctgaatcagtgtcaagtcttctgtaaagctgagaggaaagcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccaggctggggtctgaagctgaatcagtgtcaagtcttctgtaaagctgagaggaaagcc 444
Query: 242 cctctctgaagcttaacccctggagctagcatgtacatcataccttgctgatgtactgag 301
|||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct: 445 cctctctgaagcataacccctggagctagcatgtacatcataccatgctgatgcactgag 504
Query: 302 gaaacacctcctagagtgagcaccccgaagtctctgcagccggctgcctttatcaagcag 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaacacctcctagagtgagcaccccgaagtctctgcagccggctgcctttatcaagcag 564
Query: 362 tgattggggggtcctgggagatgagttgctaatttttgtagtaagccttatgaaactaca 421
||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgattggggt-tcctgggagatgagttgctaatttttgtagtaagccttatgaaactaca 623
Query: 422 ccattctacatatattcatataactctccatgccgataaagctaaaacttaacaagacaa 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ccattctacatatattcatataactctccatgccgataaagctaaaacttaacaagacaa 683
Query: 482 gagcccagcataagtgtcgtcagag 506
||||| |||||||||||||||||||
Sbjct: 684 gagcctagcataagtgtcgtcagag 708
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 506
Length of database: 908
Length adjustment: 10
Effective length of query: 496
Effective length of database: 898
Effective search space: 445408
Effective search space used: 445408
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no522_p20.g1 MSMg01no522_p20.g1 CHROMAT_FILE:
MSMg01no522_p20.g1 PHD_FILE: MSMg01no522_p20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:56:45 2005
(345 letters)
>mm_chr17_87228108_87228852
Length = 745
Score = 658 bits (340), Expect = 0.0
Identities = 343/344 (99%)
Strand = Plus / Minus
Query: 1 atctggaggatccaagccagagagtgaactgtggtgctgtcattagggcagacaagagcg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 544 atctggaggatccaagccagagagtgaactgtggtgctgtcattagggcagacaatagcg 485
Query: 61 ctctcagcctgctttctttttcagaagtcatgtagagacctctgaaccgggatcctgctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 ctctcagcctgctttctttttcagaagtcatgtagagacctctgaaccgggatcctgctc 425
Query: 121 atggcatggatataacccattctaacaaggctcagggaatgtgctctgagccttcaaccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 atggcatggatataacccattctaacaaggctcagggaatgtgctctgagccttcaaccc 365
Query: 181 tccaccagacccctgggccaggcctgcttaccgggggccatgttcgcactgatggtcttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tccaccagacccctgggccaggcctgcttaccgggggccatgttcgcactgatggtcttg 305
Query: 241 tcaggcatcaaaggacaggtcccgcccatgaggctcttcatacgtttccacatcaagtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 tcaggcatcaaaggacaggtcccgcccatgaggctcttcatacgtttccacatcaagtgt 245
Query: 301 gaactgctggtgcctggagggtccccctgcagaggtgatgtgta 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gaactgctggtgcctggagggtccccctgcagaggtgatgtgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
