Query= MSMg01no523_g21.b1 MSMg01no523_g21.b1 CHROMAT_FILE:
MSMg01no523_g21.b1 PHD_FILE: MSMg01no523_g21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:20 2005
(613 letters)
>mm_chr17_46935791_46936802
Length = 1012
Score = 1139 bits (589), Expect = 0.0
Identities = 607/613 (99%), Gaps = 1/613 (0%)
Strand = Plus / Plus
Query: 1 aattcattagtagccatgtgctgcaggcatccaggggccatcttgaatggtaaccatgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aattcattagtagccatgtgctgcaggcatccaggggccatcttgaatggtaaccatgtg 260
Query: 61 gctatgagaagagcctgtgacagagagatcagggcagcccagacagaggtctaactggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gctatgagaagagcctgtgacagagagatcagggcagcccagacagaggtctaactggta 320
Query: 121 aacaactcatctttctaatgtgttataatacaggaaggaagtcagcaacttggacattgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacaactcatctttctaatgtgttataatacaggaaggaagtcagcaacttggacattgg 380
Query: 181 cacagagaaggaagaaaaggacaactctaagacagcccagactcttctagtttggttggc 240
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 cacagagaaggaagaaaaggacaactcgaagacagcccagactcttctagtttggttggc 440
Query: 241 tgggctatgtgttgggagaaggtccatcgctctcaaagactggctgtctcacagagtttt 300
|||||| || | |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggctgtgggc-gggagaaggtccatcgctctcaaagactggctgtctcacagagtttt 499
Query: 301 tttgtgtagtggacagaggggtaaaaaaggcccacacagtctgctattgctcaaatttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttgtgtagtggacagaggggtaaaaaaggcccacacagtctgctattgctcaaatttct 559
Query: 361 ctccttctgtgtttgaggcaggggtgtgttatatagcccaagctggccttgaaccagtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ctccttctgtgtttgaggcaggggtgtgttatatagcccaagctggccttgaaccagtga 619
Query: 421 ctctcctgctttagtcacctgactgttgggattacaggtgtatgccaccatgcctagatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ctctcctgctttagtcacctgactgttgggattacaggtgtatgccaccatgcctagatt 679
Query: 481 gttgctgtgttatgtgaaaaaaagataaaaatcaaaatcaaaagccttcctttccattgc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 gttgctgtgttatgtgaaaaaaagataaaaatcaaaatcaaaagccttcctttccattgc 739
Query: 541 aggccaatctggaaaagaaacactctacatgatgaccatagggacaactccattttgggg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aggccaatctggaaaagaaacactctacatgatgaccatagggacaactccattttgggg 799
Query: 601 gtataatgaagca 613
|||||| ||||||
Sbjct: 800 gtataacgaagca 812
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 613
Length of database: 1012
Length adjustment: 10
Effective length of query: 603
Effective length of database: 1002
Effective search space: 604206
Effective search space used: 604206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no523_g21.g1 MSMg01no523_g21.g1 CHROMAT_FILE:
MSMg01no523_g21.g1 PHD_FILE: MSMg01no523_g21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:20 2005
(392 letters)
>mm_chr17_47081608_47082399
Length = 792
Score = 729 bits (377), Expect = 0.0
Identities = 386/389 (99%), Gaps = 1/389 (0%)
Strand = Plus / Minus
Query: 1 ggcaaaggcagccggatccgagttcgaggccagcctggtctacagagtgagttccaggac 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 ggcagaggcagccggatccgagttcgaggccagcctggtctacagagtgagttccaggac 631
Query: 61 agccagggctacacagagaaatcctgtctt-aaaaaaaaaaacgggggttggggaatgat 119
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 630 agccagggctacacagagaaatcctgtcttaaaaaaaaaaaacgggggttggggaatgat 571
Query: 120 aataagaaatgacaaaatcacattctcctcagaaataattgaacttcttaaaaatgtgca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 aataagaaatgacaaaatcacattctcctcagaaataattgaacttcttaaaaatgtgca 511
Query: 180 aagaataaataaccttaaaaatatatatggcattcagcttaccctctcaaccatcttaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aagaataaataaccttaaaaatatatatggcattcagcttaccctctcaaccatcttaaa 451
Query: 240 tttctagaaagaattttgagtgatgaggagaagcctgtttttggacctctgccttgtaga 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tttctagaaagaattttgagtgatgaggagaagcctgtttttggacctctgccttgtaga 391
Query: 300 ctggtaagaacactcgctcctcttagtaaaactcacttgctgtaaagatgccaaacatgt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 ctggtaagaacactcgctcctcttagtaaaactcacttgctgtaaagatgccaaacatgt 331
Query: 360 tgtatggggtctgggttacctggtgtctg 388
||||||||||||||||| |||||||||||
Sbjct: 330 tgtatggggtctgggttgcctggtgtctg 302
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 392
Length of database: 792
Length adjustment: 9
Effective length of query: 383
Effective length of database: 783
Effective search space: 299889
Effective search space used: 299889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
