Query= MSMg01no523_k09.b1 MSMg01no523_k09.b1 CHROMAT_FILE:
MSMg01no523_k09.b1 PHD_FILE: MSMg01no523_k09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:38 2005
(219 letters)
>mm_chr17_69368586_69369205
Length = 620
Score = 402 bits (208), Expect = e-117
Identities = 217/220 (98%), Gaps = 1/220 (0%)
Strand = Plus / Minus
Query: 1 aaccttggcacactcggttccgatgtataaagatgtaattaccacctaggccatgtgtat 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 420 aaccttggcacactcggttccgacgtataaagatgtaattaccacctaggccatgtgtat 361
Query: 61 tggcatcttgtcatgatttttattttcttactcttgataactaatgacagaagacatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tggcatcttgtcatgatttttattttcttactcttgataactaatgacagaagacatttt 301
Query: 121 aagtgggtccactgaccacttacatgtctcctgttgcataaaactctgagtccaatgcct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 aagtgggtccactgaccacttacatgtctcctgttgcataaaactctgagtccaatgcct 241
Query: 181 atgtttttaatttgcatggctattttttttt-aaccaaag 219
|||||||||||||| |||||||||||||||| ||||||||
Sbjct: 240 atgtttttaatttggatggctattttttttttaaccaaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 219
Length of database: 620
Length adjustment: 9
Effective length of query: 210
Effective length of database: 611
Effective search space: 128310
Effective search space used: 128310
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no523_k09.g1 MSMg01no523_k09.g1 CHROMAT_FILE:
MSMg01no523_k09.g1 PHD_FILE: MSMg01no523_k09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 20:57:38 2005
(323 letters)
>mm_chr17_69224942_69225663
Length = 722
Score = 532 bits (275), Expect = e-155
Identities = 311/323 (96%), Gaps = 1/323 (0%)
Strand = Plus / Plus
Query: 1 ttcctccaataccaacccttatgctcacttgttgcactgtttcacagatcgacttaagaa 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 ttcctccaataccaacccttatgctcacttgttgcactgtttcacaggtcgacttaagaa 260
Query: 61 ggcaaagccatgaccagctcttgctttgacttaactatttaccaggcccctgttctgctc 120
||||||||||||||||||| |||||||||||||||||||| | ||| | ||||||||||
Sbjct: 261 ggcaaagccatgaccagcttttgctttgacttaactatttgc-aggtgcttgttctgctc 319
Query: 121 ttctatgtgtctgatcaaccccttctgaaaacccagatgttccttcattttatttactgc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ttctatgtgtctgatcaaccccttctgaaaacccagatgttccttcattttatttactgt 379
Query: 181 attacctcaaatagaggcctcccgctaattagtcttccagatggttttccgacggagggg 240
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 380 attacctcaaatagaggcctcccgctaattagtcttccagatggctttccgacggagggg 439
Query: 241 cgttacttcaactctgcttgcacccagcttggagagctaccctggggtttgctcgtgttc 300
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 440 cgttacttaaactctgcttgcacccagcttggagagctaccctggggtttgcttgtgttc 499
Query: 301 ttctggcatgctccccctctcag 323
|||||||||||||||| ||||||
Sbjct: 500 ttctggcatgctccccatctcag 522
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 722
Length adjustment: 9
Effective length of query: 314
Effective length of database: 713
Effective search space: 223882
Effective search space used: 223882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
